RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 FRA10AC1Q70Z53 315 aa14.5□□□□□ -0.09
CTR9-201ENST00000361367 PRRT2Q7Z6L0 340 aaPredicted RBP14.5□□□□□ -0.09
CTR9-201ENST00000361367 PPTC7Q8NI37 304 aa14.5□□□□□ -0.09
CTR9-201ENST00000361367 MRPL9Q9BYD2 267 aaKnown RBP14.5□□□□□ -0.09
CTR9-201ENST00000361367 CELF4Q9BZC1 486 aaKnown RBP14.5□□□□□ -0.09
CTR9-201ENST00000361367 TRPM5Q9NZQ8 1165 aa14.5□□□□□ -0.09
CTR9-201ENST00000361367 TPX2Q9ULW0 747 aaKnown RBP14.5□□□□□ -0.09
CTR9-201ENST00000361367 HES2Q9Y543 173 aa14.5□□□□□ -0.09
CTR9-201ENST00000361367 MTSS1O43312 755 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 HSPA4LO95757 839 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 BMP6P22004 513 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 TYK2P29597 1187 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 TKTL1P51854 596 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 MRPS6P82932 125 aaKnown RBP14.49□□□□□ -0.09
CTR9-201ENST00000361367 ECM1Q16610 540 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 NOL9Q5SY16 702 aaKnown RBP14.49□□□□□ -0.09
CTR9-201ENST00000361367 FAM131BQ86XD5 332 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.49□□□□□ -0.09
CTR9-201ENST00000361367 C9orf72Q96LT7 481 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 RAD51CO43502 376 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 CHEK2O96017 543 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 ELNP15502 786 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 PTENP60484 403 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 CENPCQ03188 943 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 NSUN2Q08J23 767 aaKnown RBP eCLIP14.49□□□□□ -0.09
CTR9-201ENST00000361367 RASSF3Q86WH2 238 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 BHMTQ93088 406 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 RNF19AQ9NV58 838 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 COL20A1Q9P218 1284 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 NEU2Q9Y3R4 380 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 LRRC10BA6NIK2 292 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 PSMD3O43242 534 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 CTIFO43310 598 aaKnown RBP14.49□□□□□ -0.09
CTR9-201ENST00000361367 RTP1P59025 263 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 NOP9Q86U38 636 aaKnown RBP14.49□□□□□ -0.09
CTR9-201ENST00000361367 RXFP2Q8WXD0 754 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 CYTH2Q99418 400 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 GPR20Q99678 358 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 CDT1Q9H211 546 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 ASTN1O14525 1302 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 GJB1P08034 283 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 HYIQ5T013 277 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 LRRC55Q6ZSA7 311 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 NYAP1Q6ZVC0 841 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 CLEC4DQ8WXI8 215 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 RASSF4Q9H2L5 321 aa14.49□□□□□ -0.09
CTR9-201ENST00000361367 G3BP2Q9UN86 482 aaKnown RBP14.49□□□□□ -0.09
CTR9-201ENST00000361367 UMODL1Q5DID0 1318 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 DLG4P78352 724 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 DNAAF5Q86Y56 855 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 PPHLN1Q8NEY8 458 aaKnown RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 RNPEPQ9H4A4 650 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 ZC3H7BQ9UGR2 993 aaKnown RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 XPO7Q9UIA9 1087 aaKnown RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 PHRF1Q9P1Y6 1649 aaKnown RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 CCDC78A2IDD5 438 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 SNX2O60749 519 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 PROSCO94903 275 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 SCNN1GP51170 649 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 STAT4Q14765 748 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 FAM71DQ8N9W8 422 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 RUBCNQ92622 972 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 KRT35Q92764 455 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 EXOC4Q96A65 974 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 RAB3IPQ96QF0 476 aaPredicted RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 ADRB2P07550 413 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 COPS2P61201 443 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 PDCLQ13371 301 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 MAP3K21Q5TCX8 1036 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 CRLF3Q8IUI8 442 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 CFAP61Q8NHU2 1237 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 MAML1Q92585 1016 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 PITPNM3Q9BZ71 974 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 CYP4F11Q9HBI6 524 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 ZNF214Q9UL59 606 aaPredicted RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 MLH1P40692 756 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 TWF1Q12792 350 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 EFEMP1Q12805 493 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 CDH18Q13634 790 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 PCBP1Q15365 356 aaKnown RBP eCLIP14.48□□□□□ -0.09
CTR9-201ENST00000361367 PCSK7Q16549 785 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 SLFN11Q7Z7L1 901 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 NOA1Q8NC60 698 aaKnown RBP14.48□□□□□ -0.09
CTR9-201ENST00000361367 ATXN7L3BQ96GX2 97 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 ERP44Q9BS26 406 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 MLXIPLQ9NP71 852 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 PCDHB5Q9Y5E4 795 aa14.48□□□□□ -0.09
CTR9-201ENST00000361367 HMGCRP04035 888 aa14.47□□□□□ -0.09
CTR9-201ENST00000361367 MBL2P11226 248 aaPredicted RBP14.47□□□□□ -0.09
CTR9-201ENST00000361367 IKBKEQ14164 716 aa14.47□□□□□ -0.09
CTR9-201ENST00000361367 SLC9A9Q8IVB4 645 aa14.47□□□□□ -0.09
CTR9-201ENST00000361367 WDR75Q8IWA0 830 aaKnown RBP14.47□□□□□ -0.09
CTR9-201ENST00000361367 ACO2Q99798 780 aaKnown RBP14.47□□□□□ -0.09
CTR9-201ENST00000361367 SLC13A1Q9BZW2 595 aa14.47□□□□□ -0.09
CTR9-201ENST00000361367 MAF1Q9H063 256 aa14.47□□□□□ -0.09
CTR9-201ENST00000361367 GPATCH2LQ9NWQ4 482 aa14.47□□□□□ -0.09
CTR9-201ENST00000361367 CNTNAP2Q9UHC6 1331 aa14.47□□□□□ -0.09
CTR9-201ENST00000361367 CCDC160A6NGH7 325 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms