RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CAMTA2O94983 1202 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 ASNSP08243 561 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 KCTD2Q14681 263 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 APBB2Q92870 758 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 BLOC1S4Q9NUP1 217 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 NSMCE4AQ9NXX6 385 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 BTBD7Q9P203 1132 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 SUGT1Q9Y2Z0 365 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 TRPC5OSA6NMA1 111 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 TNFAIP8O95379 198 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 NPR1P16066 1061 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 ADORA2BP29275 332 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 C2CD6Q53TS8 623 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 DUPD1Q68J44 220 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 LPCAT2Q7L5N7 544 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 NET1Q7Z628 596 aaPredicted RBP14.52□□□□□ -0.09
SMC5-201ENST00000361138 MAGEB5Q9BZ81 275 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 APPL1Q9UKG1 709 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 NCANO14594 1321 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 DGAT1O75907 488 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 LCP1P13796 627 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 GPD1P21695 349 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 ADARP55265 1226 aaKnown RBP14.52□□□□□ -0.09
SMC5-201ENST00000361138 DAB2P98082 770 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 OTUD4Q01804 1114 aaKnown RBP14.52□□□□□ -0.09
SMC5-201ENST00000361138 DEFB107AQ8IZN7 70 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 ILKAPQ9H0C8 392 aaPredicted RBP14.52□□□□□ -0.09
SMC5-201ENST00000361138 TDRD3Q9H7E2 651 aaKnown RBP14.52□□□□□ -0.09
SMC5-201ENST00000361138 LRRC4BQ9NT99 713 aa14.52□□□□□ -0.09
SMC5-201ENST00000361138 PXDNQ92626 1479 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 TPP2P29144 1249 aaPredicted RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 SKIV2L2P42285 1042 aaKnown RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 PHKA2P46019 1235 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 CCNHP51946 323 aaPredicted RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 NLGN1Q8N2Q7 840 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 PSPC1Q8WXF1 523 aaKnown RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 SLC5A5Q92911 643 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 FNDC3AQ9Y2H6 1198 aaKnown RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 ATP5BP06576 529 aaKnown RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 CCDC159P0C7I6 412 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 RRM1P23921 792 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 SERPINB1P30740 379 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 RPS6P62753 249 aaKnown RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 PLA2G4FQ68DD2 849 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 ZCCHC9Q8N567 271 aaKnown RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 ZC4H2Q9NQZ6 224 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMC5-201ENST00000361138 ACTL7BQ9Y614 415 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 TECPR2O15040 1411 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 SULT1E1P49888 294 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 MCL1Q07820 350 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 ARMCX1Q9P291 453 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 SHOC2Q9UQ13 582 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 FLT3P36888 993 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 AGAP3Q96P47 875 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 SOX13Q9UN79 622 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 ATP11BQ9Y2G3 1177 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 NDUFB10O96000 172 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 NUP107P57740 925 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 B3GNT6Q6ZMB0 384 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 PODNQ7Z5L7 613 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 ARHGEF19Q8IW93 802 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 PARD3BQ8TEW8 1205 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 RIT2Q99578 217 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 MXRA8Q9BRK3 442 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 EFCAB1Q9HAE3 211 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 PCDH9Q9HC56 1237 aa14.51□□□□□ -0.09
SMC5-201ENST00000361138 CPSF3Q9UKF6 684 aaKnown RBP14.51□□□□□ -0.09
SMC5-201ENST00000361138 ABLIM1O14639 778 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 HADHAP40939 763 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 PRKCIP41743 596 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 ZNF720Q7Z2F6 126 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMC5-201ENST00000361138 IFT43Q96FT9 208 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 INPP4AQ96PE3 977 aaPredicted RBP14.5□□□□□ -0.09
SMC5-201ENST00000361138 GANQ9H2C0 597 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 F8W8V4 182 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 CNTFP26441 200 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 EFNA5P52803 228 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 TCHHL1Q5QJ38 904 aaPredicted RBP14.5□□□□□ -0.09
SMC5-201ENST00000361138 FAM81AQ8TBF8 368 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 KRT35Q92764 455 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMC5-201ENST00000361138 TMEM131LA2VDJ0 1609 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 MROH7Q68CQ1 1323 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 A8MUI8 341 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 ENTPD5O75356 428 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 IMPG1Q17R60 797 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 SNX13Q9Y5W8 968 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.5□□□□□ -0.09
SMC5-201ENST00000361138 RBAK-RBAKDNI3L0D1 243 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 M0R3G1 203 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 WDR72Q3MJ13 1102 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 LAYNQ6UX15 382 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 EXOC3L1Q86VI1 746 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 CDC26Q8NHZ8 85 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 VPS50Q96JG6 964 aa14.5□□□□□ -0.09
SMC5-201ENST00000361138 PURBQ96QR8 312 aaKnown RBP14.5□□□□□ -0.09
SMC5-201ENST00000361138 PRPF18Q99633 342 aaKnown RBP14.5□□□□□ -0.09
SMC5-201ENST00000361138 DMAP1Q9NPF5 467 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms