RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CFHP08603 1231 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 ELK3P41970 407 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 NCKAP1LP55160 1127 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 C1QBPQ07021 282 aaKnown RBP7.15□□□□□ -1.26
RTN4-203ENST00000357376 SURF1Q15526 300 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 CHI3L2Q15782 390 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 NDUFAF2Q8N183 169 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 OR6B3Q8NGW1 331 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 NSL1Q96IY1 281 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 SCYL1Q96KG9 808 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 PPP1R36Q96LQ0 422 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 SLITRK1Q96PX8 696 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 CGRRF1Q99675 332 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 TMEM120AQ9BXJ8 343 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 MYOZ2Q9NPC6 264 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 FIS1Q9Y3D6 152 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 CSADQ9Y600 493 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 ITGB4P16144 1822 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 MYH14Q7Z406 1995 aaKnown RBP7.15□□□□□ -1.26
RTN4-203ENST00000357376 CFLARO15519 480 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 UBTFL6P0CB48 400 aaPredicted RBP7.15□□□□□ -1.26
RTN4-203ENST00000357376 OSBPP22059 807 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 BNIP1Q12981 228 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 ZBTB41Q5SVQ8 909 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 STYK1Q6J9G0 422 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 RAPH1Q70E73 1250 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 TRABD2AQ86V40 505 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 ZDHHC14Q8IZN3 488 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 LMO3Q8TAP4 145 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 SLC26A7Q8TE54 656 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 DDX27Q96GQ7 796 aaKnown RBP7.15□□□□□ -1.26
RTN4-203ENST00000357376 VCX3BQ9H321 246 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 SLC38A10Q9HBR0 1119 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 PCDH9Q9HC56 1237 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 FAM49BQ9NUQ9 324 aa7.15□□□□□ -1.26
RTN4-203ENST00000357376 FOXN2P32314 431 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 SNX16P57768 344 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 MCL1Q07820 350 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 RBBP5Q15291 538 aaKnown RBP7.15□□□□□ -1.27
RTN4-203ENST00000357376 SLC1A5Q15758 541 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 ZACNQ401N2 412 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 SPDYE2Q495Y8 402 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 CRELD2Q6UXH1 353 aaPredicted RBP7.15□□□□□ -1.27
RTN4-203ENST00000357376 EP400NLQ6ZTU2 488 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 TTC8Q8TAM2 541 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 SEC14L1Q92503 715 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 ALKBH8Q96BT7 664 aaKnown RBP7.15□□□□□ -1.27
RTN4-203ENST00000357376 FIZ1Q96SL8 496 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 NDE1Q9NXR1 346 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 SLC12A4Q9UP95 1085 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 SHOC2Q9UQ13 582 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 APOBEC2Q9Y235 224 aaKnown RBP7.15□□□□□ -1.27
RTN4-203ENST00000357376 ECM29Q5VYK3 1845 aa7.15□□□□□ -1.27
RTN4-203ENST00000357376 KBTBD13C9JR72 458 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 SUPT20HL2P0C7V6 817 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 KCNA3P22001 575 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 PTPN4P29074 926 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 RFC1P35251 1148 aaPredicted RBP7.14□□□□□ -1.27
RTN4-203ENST00000357376 ARL4AP40617 200 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 TNFSF9P41273 254 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 MMP14P50281 582 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 HADHBP55084 474 aaKnown RBP7.14□□□□□ -1.27
RTN4-203ENST00000357376 GEN1Q17RS7 908 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 SUPT20HL1Q3ZLR7 823 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 PRPF39Q86UA1 669 aaKnown RBP7.14□□□□□ -1.27
RTN4-203ENST00000357376 C12orf56Q8IXR9 622 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 SLC25A41Q8N5S1 370 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 GLIS1Q8NBF1 620 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 ASAP3Q8TDY4 903 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 TMEM109Q9BVC6 243 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 WWP1Q9H0M0 922 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 DEFB129Q9H1M3 183 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 A1CFQ9NQ94 594 aaKnown RBP7.14□□□□□ -1.27
RTN4-203ENST00000357376 SLC24A2Q9UI40 661 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 POLIQ9UNA4 740 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 COL4A1P02462 1669 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 LOC100653049A0A140TA62 436 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 CCDC78A2IDD5 438 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 WNT10BO00744 389 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 KRT34O76011 436 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 ITGB3P05106 788 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 TCF4P15884 667 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 GLRA2P23416 452 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 EFNA5P52803 228 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 KCTD2Q14681 263 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 CYP1B1Q16678 543 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 EMC10Q5UCC4 262 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 RNF43Q68DV7 783 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 HEATR6Q6AI08 1181 aaKnown RBP7.14□□□□□ -1.27
RTN4-203ENST00000357376 MICALL2Q8IY33 904 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 STK32AQ8WU08 396 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 CNKSR2Q8WXI2 1034 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 ZBTB10Q96DT7 871 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 RNPEPL1Q9HAU8 725 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 FBXO6Q9NRD1 293 aaPredicted RBP7.14□□□□□ -1.27
RTN4-203ENST00000357376 PIH1D1Q9NWS0 290 aaKnown RBP7.14□□□□□ -1.27
RTN4-203ENST00000357376 HOXC10Q9NYD6 342 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 C2orf71A6NGG8 1288 aa7.14□□□□□ -1.27
RTN4-203ENST00000357376 VWA5AO00534 786 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms