RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 TRPM4Q8TD43 1214 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 NLRP4Q96MN2 994 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 TGS1Q96RS0 853 aaKnown RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 FAM192AQ9GZU8 254 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 ARHGEF3Q9NR81 526 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 WDR91A4D1P6 747 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 VWA5AO00534 786 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 PAEPP09466 180 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 GARTP22102 1010 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 CA4P22748 312 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 ADSSP30520 456 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 HOXD12P35452 270 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 ARSEP51690 589 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 CCNG1P51959 295 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 NLRP11P59045 1033 aaKnown RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 CUL2Q13617 745 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 TMCO5AQ8N6Q1 288 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 HELQQ8TDG4 1101 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 PITPNM3Q9BZ71 974 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 ROPN1BQ9BZX4 212 aaPredicted RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 ROPN1Q9HAT0 212 aaPredicted RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 NOCTQ9UK39 431 aaKnown RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 TSC22D4Q9Y3Q8 395 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 GMEB1Q9Y692 573 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 A6NJR5 290 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 NUDT17P0C025 328 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 NCKAP1LP55160 1127 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 EXOC3L1Q86VI1 746 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 SPATA24Q86W54 205 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 CCDC60Q8IWA6 550 aaPredicted RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 SCG3Q8WXD2 468 aaKnown RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 SPATA16Q9BXB7 569 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
SFPQ-201ENST00000357214 PARVAQ9NVD7 372 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 CTNNAL1Q9UBT7 734 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 RIPK3Q9Y572 518 aa13.03□□□□□ -0.32
SFPQ-201ENST00000357214 COL5A3P25940 1745 aaPredicted RBP13.02□□□□□ -0.32
SFPQ-201ENST00000357214 SNX3O60493 162 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 PEX11AO75192 247 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 FDX1P10109 184 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 GNAZP19086 355 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 TBXAS1P24557 533 aaPredicted RBP13.02□□□□□ -0.32
SFPQ-201ENST00000357214 POLR2BP30876 1174 aaKnown RBP13.02□□□□□ -0.32
SFPQ-201ENST00000357214 PTGIRP43119 386 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 OXCT1P55809 520 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 SNX30Q5VWJ9 437 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 FAM160B1Q5W0V3 765 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 ZDHHC24Q6UX98 284 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 PIGWQ7Z7B1 504 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.02□□□□□ -0.324e-6■■■■■ 55.4
SFPQ-201ENST00000357214 CYP4X1Q8N118 509 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 RIBC1Q8N443 379 aaPredicted RBP13.02□□□□□ -0.32
SFPQ-201ENST00000357214 LZICQ8WZA0 190 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 MCEEQ96PE7 176 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 CALN1Q9BXU9 219 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 DDX18Q9NVP1 670 aaKnown RBP13.02□□□□□ -0.32
SFPQ-201ENST00000357214 IP6K2Q9UHH9 426 aa13.02□□□□□ -0.32
SFPQ-201ENST00000357214 PLA2G6O60733 806 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 PROSCO94903 275 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 PSMA2P25787 234 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.33
SFPQ-201ENST00000357214 VHLP40337 213 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 BNIP1Q12981 228 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 AUHQ13825 339 aaKnown RBP13.02□□□□□ -0.33
SFPQ-201ENST00000357214 BBS9Q3SYG4 887 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 FKBP1CQ5VVH2 108 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 PPP1R21Q6ZMI0 780 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 RDM1Q8NG50 284 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 SLC35B4Q969S0 331 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.33
SFPQ-201ENST00000357214 SPON1Q9HCB6 807 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 ZDHHC18Q9NUE0 388 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 UTP6Q9NYH9 597 aaKnown RBP13.02□□□□□ -0.33
SFPQ-201ENST00000357214 GRHL1Q9NZI5 618 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 WHRNQ9P202 907 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 TBC1D12O60347 775 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 PGK2P07205 417 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 WEE2P0C1S8 567 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 TROVE2P10155 538 aaKnown RBP eCLIP13.02□□□□□ -0.33
SFPQ-201ENST00000357214 GTF2H1P32780 548 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 CHKAP35790 457 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 MTTPP55157 894 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 GCNT1Q02742 428 aa13.02□□□□□ -0.33
SFPQ-201ENST00000357214 PLOD1Q02809 727 aaPredicted RBP13.02□□□□□ -0.33
SFPQ-201ENST00000357214 BTG3Q14201 252 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms