RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 XRRA1Q6P2D8 792 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 TMPRSS6Q8IU80 811 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 CLEC4FQ8N1N0 589 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 DDI1Q8WTU0 396 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 TMEM237Q96Q45 408 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 NSMCE4AQ9NXX6 385 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 RPS6KL1Q9Y6S9 549 aa16.24■□□□□ 0.19
TRAPPC11-202ENST00000357207 CYTH3O43739 400 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 BNIP3LO60238 219 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 IL18RAPO95256 599 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 APOA1P02647 267 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 EPHB2P29323 1055 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 HNRNPH3P31942 346 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 PTGER2P43116 358 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 IQCKQ8N0W5 287 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 ASAP3Q8TDY4 903 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 STK32AQ8WU08 396 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 PCDH9Q9HC56 1237 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 PDGFRBP09619 1106 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 HSPA1AP0DMV8 641 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 HSPA1BP0DMV9 641 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 SLC34A1Q06495 639 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 KCNV1Q6PIU1 500 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 SPON2Q9BUD6 331 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 RTFDC1Q9BY42 306 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 HACD3Q9P035 362 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 MAP3K6O95382 1288 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 NEK2P51955 445 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 KCNA1Q09470 495 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 DALRD3Q5D0E6 543 aaKnown RBP16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 ATF7IP2Q5U623 682 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 USP33Q8TEY7 942 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 SNX19Q92543 992 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 ELMO2Q96JJ3 720 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 CNBD2Q96M20 576 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 TAAR1Q96RJ0 339 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 NAT9Q9BTE0 207 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 RUBCNLQ9H714 662 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 DNAJC16Q9Y2G8 782 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 VWDEQ8N2E2 1590 aa16.23■□□□□ 0.19
TRAPPC11-202ENST00000357207 RNF225M0QZC1 329 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 DNALI1O14645 258 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 TKFCQ3LXA3 575 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 SWT1Q5T5J6 900 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 BTBD8Q5XKL5 378 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 CDR2LQ86X02 465 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 MCOLN2Q8IZK6 566 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 BAP1Q92560 729 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 EFCAB1Q9HAE3 211 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 EEF2KO00418 725 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 TXNP10599 105 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 VCPP55072 806 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 LRRC55Q6ZSA7 311 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 TCP10LQ8TDR4 215 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 BTBD10Q9BSF8 475 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 TRIM62Q9BVG3 475 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 ZNF518BQ9C0D4 1074 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 DNAJC18Q9H819 358 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 KIF17Q9P2E2 1029 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 DCDC2Q9UHG0 476 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 APOA4P06727 396 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 EFHC1Q5JVL4 640 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 IER5Q5VY09 327 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 F8W8V4 182 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 FCHO1O14526 889 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 SNUPNO95149 360 aaKnown RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 CBX6O95503 412 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 PECAM1P16284 738 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 NFIAQ12857 509 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 CRELD2Q6UXH1 353 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 CCNJLQ8IV13 435 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 AGAP11Q8TF27 550 aa16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 INPP4AQ96PE3 977 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC11-202ENST00000357207 CLPTM1O96005 669 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 VEGFAP15692 232 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 TRPC1P48995 793 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 SEZ6Q53EL9 994 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 TTC33Q6PID6 262 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 GLIS3Q8NEA6 775 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 JADE3Q92613 823 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 CNDP1Q96KN2 507 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 ADRM1Q16186 407 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 SNRNP27Q8WVK2 155 aaKnown RBP16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 CKAP2Q8WWK9 683 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 OLA1Q9NTK5 396 aaKnown RBP16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 GID8Q9NWU2 228 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 FAM8A1Q9UBU6 413 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 ITSN1Q15811 1721 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 NWD1Q149M9 1564 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 MTSS1O43312 755 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 GRK2P25098 689 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 FDFT1P37268 417 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 PLOD1Q02809 727 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 CNGA2Q16280 664 aa16.21■□□□□ 0.19
TRAPPC11-202ENST00000357207 ZNF555Q8NEP9 628 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms