RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CYFIP2Q96F07 1278 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 HNRNPABQ99729 332 aaKnown RBP16.52■□□□□ 0.23
TRIM13-201ENST00000356017 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 MYO6Q9UM54 1294 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
TRIM13-201ENST00000356017 RNF225M0QZC1 329 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-201ENST00000356017 ZMYND10O75800 440 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 SEC24AO95486 1093 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 VNN2O95498 520 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 GLP2RO95838 553 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 HNRNPA1P09651 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRIM13-201ENST00000356017 CD19P15391 556 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 STAT1P42224 750 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 MAGEA11P43364 429 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 ALDH1A3P47895 512 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 PLD1Q13393 1074 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 MGAT5BQ3V5L5 792 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 PPM1LQ5SGD2 360 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 ARHGAP17Q68EM7 881 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 SPECC1LQ69YQ0 1117 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 EP400NLQ6ZTU2 488 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 VN1R2Q8NFZ6 395 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 SLC7A14Q8TBB6 771 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 PPM1EQ8WY54 764 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 MED10Q9BTT4 135 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 B3GNT5Q9BYG0 378 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 GPR88Q9GZN0 384 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 SFXN1Q9H9B4 322 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 AJAP1Q9UKB5 411 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-201ENST00000356017 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 MYO7AQ13402 2215 aa16.51■□□□□ 0.23
TRIM13-201ENST00000356017 LINC01565O15544 149 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 CCDC172P0C7W6 258 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 HAPLN1P10915 354 aaPredicted RBP16.5■□□□□ 0.23
TRIM13-201ENST00000356017 BDNFP23560 247 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 JAM2P57087 298 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 RPL10AP62906 217 aaKnown RBP16.5■□□□□ 0.23
TRIM13-201ENST00000356017 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 ANKRD54Q6NXT1 300 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 FUKQ8N0W3 1084 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 ZNF397Q8NF99 534 aaPredicted RBP16.5■□□□□ 0.23
TRIM13-201ENST00000356017 MAFAQ8NHW3 353 aaPredicted RBP16.5■□□□□ 0.23
TRIM13-201ENST00000356017 SLC2A14Q8TDB8 520 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 CEP295NLQ96MC4 621 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 SEPT5Q99719 369 aaPredicted RBP16.5■□□□□ 0.23
TRIM13-201ENST00000356017 LPIN3Q9BQK8 851 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 ATG2AQ2TAZ0 1938 aa16.5■□□□□ 0.23
TRIM13-201ENST00000356017 A0A1W2PQJ5 194 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 CYP26A1O43174 497 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 MED7O43513 233 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 LRG1P02750 347 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 CCDC130P13994 396 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 CYP2F1P24903 491 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 SOX5P35711 763 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 SLC8A3P57103 927 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
TRIM13-201ENST00000356017 TRIM14Q14142 442 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 CCDC142Q17RM4 750 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 PPP1R26Q5T8A7 1209 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-201ENST00000356017 CYP26C1Q6V0L0 522 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 FAM35AQ86V20 835 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 VSTM4Q8IW00 320 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 CMASQ8NFW8 434 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-201ENST00000356017 MRFAP1L1Q96HT8 127 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 TTYH3Q9C0H2 523 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 NUCKS1Q9H1E3 243 aaKnown RBP16.49■□□□□ 0.23
TRIM13-201ENST00000356017 COG5Q9UP83 839 aa16.49■□□□□ 0.23
TRIM13-201ENST00000356017 TRIM66O15016 1216 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 AP5Z1O43299 807 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 XYLBO75191 536 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 PAPLNO95428 1278 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 POU2F2P09086 479 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 FAM200BP0CF97 657 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 GNA15P30679 374 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 GRIK1P39086 918 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 EPHB3P54753 998 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ITIH3Q06033 890 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 CNGA2Q16280 664 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 PAQR9Q6ZVX9 377 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ELMOD1Q8N336 334 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 HLA-CQ95604 372 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 CRISPLD1Q9H336 500 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 CLEC1BQ9P126 229 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 HESX1Q9UBX0 185 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 YIPF1Q9Y548 306 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.48■□□□□ 0.23
TRIM13-201ENST00000356017 CCDC195A0A1B0GUA6 201 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 CLDN5O00501 218 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 TBX10O75333 385 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 TPM1P09493 284 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ANXA13P27216 316 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ADORA2BP29275 332 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 CLCN1P35523 988 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 LTBRP36941 435 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ZNF75DP51815 510 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms