RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 STX18Q9P2W9 335 aaKnown RBP17.03■□□□□ 0.32
SHTN1-202ENST00000355371 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 PCSK7Q16549 785 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 SHCBP1Q8NEM2 672 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 ZNF669Q96BR6 464 aaPredicted RBP17.03■□□□□ 0.32
SHTN1-202ENST00000355371 VPS9D1Q9Y2B5 631 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 HDAC4P56524 1084 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 HUNKP57058 714 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 ATP8B4Q8TF62 1192 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 ADARB2Q9NS39 739 aaKnown RBP17.03■□□□□ 0.32
SHTN1-202ENST00000355371 TRAF3IP3Q9Y228 551 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 MEI1Q5TIA1 1274 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 CHSY1Q86X52 802 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
SHTN1-202ENST00000355371 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 EPHB2P29323 1055 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 FOXD4Q12950 439 aaPredicted RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 PLEKHH3Q7Z736 793 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 MARCOQ9UEW3 520 aaPredicted RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 BCL9O00512 1426 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 M0QYT0 321 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 PROSCO94903 275 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 RARGP13631 454 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 GEMP55040 296 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 C11orf63Q6NUN7 778 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 ZNF571Q7Z3V5 609 aaPredicted RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 EXD1Q8NHP7 514 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 ABTB1Q969K4 478 aaPredicted RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 WDCPQ9H6R7 721 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 RUBCNLQ9H714 662 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 VIL1P09327 827 aaKnown RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 PLA2G4AP47712 749 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 FCGRTP55899 365 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 TMED1Q13445 227 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 TMEM119Q4V9L6 283 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 TDRD10Q5VZ19 366 aaKnown RBP17.02■□□□□ 0.32
SHTN1-202ENST00000355371 RNF180Q86T96 592 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 SLC25A41Q8N5S1 370 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 PACSIN1Q9BY11 444 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 ARHGAP20Q9P2F6 1191 aa17.02■□□□□ 0.32
SHTN1-202ENST00000355371 PRPF4O43172 522 aaKnown RBP eCLIP17.02■□□□□ 0.31
SHTN1-202ENST00000355371 SRP72O76094 671 aaKnown RBP17.02■□□□□ 0.31
SHTN1-202ENST00000355371 STAG3L1P0CL83 205 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 LRRC23Q53EV4 343 aaPredicted RBP17.02■□□□□ 0.31
SHTN1-202ENST00000355371 METTL7BQ6UX53 244 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 RFX8Q6ZV50 586 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 PPP2R3CQ969Q6 453 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 AURKCQ9UQB9 309 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 SH3BP1Q9Y3L3 701 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 DUSP10Q9Y6W6 482 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 TTC30AQ86WT1 665 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 FAM163AQ96GL9 167 aaPredicted RBP17.02■□□□□ 0.31
SHTN1-202ENST00000355371 FAM167BQ9BTA0 163 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 CCDC90BQ9GZT6 254 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 COG4Q9H9E3 785 aa17.02■□□□□ 0.31
SHTN1-202ENST00000355371 PRDM5Q9NQX1 630 aaPredicted RBP17.02■□□□□ 0.31
SHTN1-202ENST00000355371 CCDC78A2IDD5 438 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 HNRNPCL2B2RXH8 293 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 NFIBO00712 420 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 RALBP11234 206 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 AKT1P31749 480 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 CLCN3P51790 818 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 BCAT1P54687 386 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 ARHGEF7Q14155 803 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 EZH2Q15910 746 aaKnown RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 CLEC16AQ2KHT3 1053 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 SEZ6Q53EL9 994 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 C10orf120Q5SQS8 335 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 PPP1R36Q96LQ0 422 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 DDIT4Q9NX09 232 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 PCDHB7Q9Y5E2 793 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 TRIM49D1C9J1S8 452 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 CELF2O95319 508 aaKnown RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 DYNC1I2Q13409 638 aaKnown RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 MDH1BQ5I0G3 518 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 BTNL9Q6UXG8 535 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 ANKS3Q6ZW76 656 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 CDR2LQ86X02 465 aaPredicted RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 LATS2Q9NRM7 1088 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 FBXO21O94952 628 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 TGFB3P10600 412 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 CCND1P24385 295 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 PGM5Q15124 567 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 MTFR1Q15390 333 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 DDX53Q86TM3 631 aaKnown RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 KIAA0895Q8NCT3 520 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 CEP70Q8NHQ1 597 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 TAS1R2Q8TE23 839 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
SHTN1-202ENST00000355371 COLEC11Q9BWP8 271 aa17.01■□□□□ 0.31
SHTN1-202ENST00000355371 FUT8Q9BYC5 575 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms