RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ATP2C2O75185 946 aa21.7■■□□□ 1.07
TRIM4-202ENST00000354241 PKDCCQ504Y2 493 aa21.7■■□□□ 1.07
TRIM4-202ENST00000354241 DCUN1D2Q6PH85 259 aa21.7■■□□□ 1.07
TRIM4-202ENST00000354241 CD300LGQ6UXG3 332 aa21.7■■□□□ 1.07
TRIM4-202ENST00000354241 FAM43BQ6ZT52 329 aaPredicted RBP21.7■■□□□ 1.07
TRIM4-202ENST00000354241 MCEEQ96PE7 176 aa21.7■■□□□ 1.07
TRIM4-202ENST00000354241 TMEM106CQ9BVX2 250 aa21.7■■□□□ 1.07
TRIM4-202ENST00000354241 TTC3P53804 2025 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 MICAL3Q7RTP6 2002 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 MIF4GDA9UHW6 222 aaKnown RBP21.7■■□□□ 1.06
TRIM4-202ENST00000354241 F8W810 466 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 CES2O00748 559 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 DYNC1I1O14576 645 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 PTPN1P18031 435 aaKnown RBP21.7■■□□□ 1.06
TRIM4-202ENST00000354241 OR1G1P47890 313 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 RGS7P49802 495 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 GATMP50440 423 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 RPL7AP62424 266 aaKnown RBP21.7■■□□□ 1.06
TRIM4-202ENST00000354241 DSC1Q08554 894 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 CFAP221Q4G0U5 840 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 XYLT1Q86Y38 959 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 SLC2A14Q8TDB8 520 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 WDR35Q9P2L0 1181 aa21.7■■□□□ 1.06
TRIM4-202ENST00000354241 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.69■■□□□ 1.06
TRIM4-202ENST00000354241 TULP2O00295 520 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 PIK3R2O00459 728 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 CEP104O60308 925 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 ITGB1P05556 798 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 SETSIPP0DME0 302 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 PAX3P23760 479 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 GABRB2P47870 512 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 RNASE9P60153 205 aaKnown RBP21.69■■□□□ 1.06
TRIM4-202ENST00000354241 PDE4CQ08493 712 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 ELF2Q15723 593 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 RSRC2Q7L4I2 434 aaKnown RBP21.69■■□□□ 1.06
TRIM4-202ENST00000354241 METTL23Q86XA0 190 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 COLGALT2Q8IYK4 626 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 UBL4BQ8N7F7 174 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 RSPH1Q8WYR4 309 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 RNF14Q9UBS8 474 aa21.69■■□□□ 1.06
TRIM4-202ENST00000354241 PROSCO94903 275 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 BCAT1P54687 386 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 TAP1Q03518 808 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 ZNF268Q14587 947 aaPredicted RBP21.68■■□□□ 1.06
TRIM4-202ENST00000354241 CCDC142Q17RM4 750 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 MDH1BQ5I0G3 518 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 ANKRD52Q8NB46 1076 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 KRT35Q92764 455 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 SYT15Q9BQS2 421 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 DNAJB4Q9UDY4 337 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 TMEM191CA6NGB0 347 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 TKTP29401 623 aaKnown RBP21.68■■□□□ 1.06
TRIM4-202ENST00000354241 C2orf54Q08AI8 447 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 BST2Q10589 180 aaKnown RBP21.68■■□□□ 1.06
TRIM4-202ENST00000354241 PPP1R15BQ5SWA1 713 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 KIAA0319Q5VV43 1072 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 PMF1Q6P1K2 205 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 NECAB2Q7Z6G3 386 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 CD101Q93033 1021 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 RPGRIP1Q96KN7 1286 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 CASD1Q96PB1 797 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 PRDM5Q9NQX1 630 aaPredicted RBP21.68■■□□□ 1.06
TRIM4-202ENST00000354241 IP6K2Q9UHH9 426 aa21.68■■□□□ 1.06
TRIM4-202ENST00000354241 KIAA0100Q14667 2235 aaKnown RBP21.68■■□□□ 1.06
TRIM4-202ENST00000354241 E5RJQ4 531 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 M0QZQ0 153 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 KRT3P12035 628 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 CTNNA2P26232 953 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 SLC1A1P43005 524 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 MARCKSL1P49006 195 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 GSCP56915 257 aaPredicted RBP21.67■■□□□ 1.06
TRIM4-202ENST00000354241 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.67■■□□□ 1.06
TRIM4-202ENST00000354241 SLC35F5Q8WV83 523 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 SUSD3Q96L08 255 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 MED10Q9BTT4 135 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 MIS12Q9H081 205 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 METTL5Q9NRN9 209 aaKnown RBP21.67■■□□□ 1.06
TRIM4-202ENST00000354241 DSEQ9UL01 958 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 USTQ9Y2C2 406 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 PRG3Q9Y2Y8 225 aaPredicted RBP21.67■■□□□ 1.06
TRIM4-202ENST00000354241 CLDN5O00501 218 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 HOXA2O43364 376 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 CYP11A1P05108 521 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 CTNNA1P35221 906 aaKnown RBP21.67■■□□□ 1.06
TRIM4-202ENST00000354241 CDR1P51861 262 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 DCAF12L1Q5VU92 463 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 OR6B2Q6IFH4 312 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 ZNF572Q7Z3I7 529 aaPredicted RBP21.67■■□□□ 1.06
TRIM4-202ENST00000354241 NPAS4Q8IUM7 802 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 UBE2Q2Q8WVN8 375 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 ALG3Q92685 438 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 HNRNPABQ99729 332 aaKnown RBP21.67■■□□□ 1.06
TRIM4-202ENST00000354241 CRTAC1Q9NQ79 661 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 CDH9Q9ULB4 789 aa21.67■■□□□ 1.06
TRIM4-202ENST00000354241 ARHGEF37A1IGU5 675 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 CCDC66A2RUB6 948 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 SIGLEC16A6NMB1 481 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 PCSK1P29120 753 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 FAM102AQ5T9C2 384 aaPredicted RBP21.66■■□□□ 1.06
TRIM4-202ENST00000354241 DAB2IPQ5VWQ8 1189 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms