RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 NCKAP1LP55160 1127 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 TPD52P55327 224 aaPredicted RBP12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 FCHO2Q0JRZ9 810 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 RAPGEF1Q13905 1077 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 PXDC1Q5TGL8 231 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 RSBN1Q5VWQ0 802 aaPredicted RBP12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 FIP1L1Q6UN15 594 aaKnown RBP12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 BARGINQ6ZT62 677 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 FANCEQ9HB96 536 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 ZNF652Q9Y2D9 606 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 IFT52Q9Y366 437 aa12.77□□□□□ -0.37
CTNNB1-201ENST00000349496 MYOCOSA0A1B0GUC4 107 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 TSPAN4O14817 238 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 GSC2O15499 205 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 GH1P01241 217 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 AQP4P55087 323 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 MTFR1Q15390 333 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 ATL1Q8WXF7 558 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 PRICKLE1Q96MT3 831 aaPredicted RBP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 BEGAINQ9BUH8 593 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 IMPG2Q9BZV3 1241 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 PCSK1NQ9UHG2 260 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 DTNAQ9Y4J8 743 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 BCL9O00512 1426 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 NTSR2O95665 410 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 KDSRQ06136 332 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 MAPK6Q16659 721 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 KLHL38Q2WGJ6 581 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 IL23RQ5VWK5 629 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 TTI2Q6NXR4 508 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 CAND1Q86VP6 1230 aaKnown RBP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 PLPP6Q8IY26 295 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 LILRB2Q8N423 598 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 ZSCAN5AQ9BUG6 496 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 MRPS26Q9BYN8 205 aaKnown RBP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 AIPL1Q9NZN9 384 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 POC1B-GALNT4F8VUJ3 575 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 STMND1H3BQB6 276 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 PRPF3O43395 683 aaKnown RBP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 CCNT1O60563 726 aaKnown RBP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A9O60656 530 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 ZBED4O75132 1171 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 KRT15P19012 456 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A6P19224 532 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A1P22309 533 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A4P22310 534 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A3P35503 534 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A5P35504 534 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 APLP1P51693 650 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 COPZ1P61923 177 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 DSC3Q14574 896 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 PPP2R5EQ16537 467 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 LETM2Q2VYF4 491 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UBE2UQ5VVX9 321 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 LZTR1Q8N653 840 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 CTRCQ99895 268 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A7Q9HAW7 530 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A10Q9HAW8 530 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 UGT1A8Q9HAW9 530 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 KCTD5Q9NXV2 234 aa12.76□□□□□ -0.37
CTNNB1-201ENST00000349496 TYW5A2RUC4 315 aaKnown RBP12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 UQCRFS1P1P0C7P4 283 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 PBX1P40424 430 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 NR4A2P43354 598 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 CENPCQ03188 943 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 CALCOCO2Q13137 446 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 CDONQ4KMG0 1287 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 PPM1LQ5SGD2 360 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 PIK3AP1Q6ZUJ8 805 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 RAPH1Q70E73 1250 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 TLK2Q86UE8 772 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 HEMGNQ9BXL5 484 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 PDGFDQ9GZP0 370 aaPredicted RBP12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 SOX13Q9UN79 622 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 RFX7Q2KHR2 1363 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 A8MXQ7 604 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 ASNA1O43681 348 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 MMP1P03956 469 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 TNNI2P48788 182 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 PAOXQ6QHF9 649 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 AMIGO2Q86SJ2 522 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 CKAP2Q8WWK9 683 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 TRIM63Q969Q1 353 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 SLC7A6OSQ96CW6 309 aaPredicted RBP12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 RNPEPQ9H4A4 650 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 LRRC4CQ9HCJ2 640 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 MCM9Q9NXL9 1143 aa12.75□□□□□ -0.37
CTNNB1-201ENST00000349496 FBXO2Q9UK22 296 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms