RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 NFKBIAP25963 317 aa18.14■□□□□ 0.5
SPAST-202ENST00000345662 PTK2BQ14289 1009 aa18.14■□□□□ 0.5
SPAST-202ENST00000345662 PDK1Q15118 436 aa18.14■□□□□ 0.5
SPAST-202ENST00000345662 MROH7Q68CQ1 1323 aa18.14■□□□□ 0.5
SPAST-202ENST00000345662 EXD1Q8NHP7 514 aa18.14■□□□□ 0.5
SPAST-202ENST00000345662 CKAP2Q8WWK9 683 aa18.14■□□□□ 0.5
SPAST-202ENST00000345662 FAM49AQ9H0Q0 323 aaPredicted RBP18.14■□□□□ 0.5
SPAST-202ENST00000345662 PCDHGB4Q9UN71 923 aa18.14■□□□□ 0.5
SPAST-202ENST00000345662 GPD1P21695 349 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 PTDSS1P48651 473 aaKnown RBP18.14■□□□□ 0.49
SPAST-202ENST00000345662 RGS7P49802 495 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 SULT1E1P49888 294 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 MCL1Q07820 350 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 ATP1A4Q13733 1029 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 EIF2B2P49770 351 aaKnown RBP18.14■□□□□ 0.49
SPAST-202ENST00000345662 NT5DC3Q86UY8 548 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 TCP10LQ8TDR4 215 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 RMND5BQ96G75 393 aaPredicted RBP18.14■□□□□ 0.49
SPAST-202ENST00000345662 PLEKHA5Q9HAU0 1116 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 NINJ2Q9NZG7 142 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 SALL1Q9NSC2 1324 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 KANSL1LA0AUZ9 987 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 RALBP11234 206 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 DRD4P21917 467 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 ATP6V1E1P36543 226 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 SEL1L3Q68CR1 1132 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 C16orf86Q6ZW13 317 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 SZRD1Q7Z422 152 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 CCNJLQ8IV13 435 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 ZNF75CPQ92670 426 aaPredicted RBP18.14■□□□□ 0.49
SPAST-202ENST00000345662 DUSP9Q99956 384 aaKnown RBP18.14■□□□□ 0.49
SPAST-202ENST00000345662 JMJD4Q9H9V9 463 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 CNGB3Q9NQW8 809 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 INTS13Q9NVM9 706 aa18.14■□□□□ 0.49
SPAST-202ENST00000345662 SLC45A4Q5BKX6 768 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 THEMIS2Q5TEJ8 643 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 SNRNP48Q6IEG0 339 aaKnown RBP18.13■□□□□ 0.49
SPAST-202ENST00000345662 B3GNT6Q6ZMB0 384 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 FAR2Q96K12 515 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 ITGB1BP2Q9UKP3 347 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 CNTFP26441 200 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 CNGA2Q16280 664 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 ABI1Q8IZP0 508 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 KIAA0895Q8NCT3 520 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 CALML6Q8TD86 181 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 BBS2Q9BXC9 721 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 SAC3D1A6NKF1 404 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 E9PBE3 544 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 KLHL41O60662 606 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 PROSCO94903 275 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 CDK16Q00536 496 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 FAXCQ5TGI0 409 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 GLMNQ92990 594 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 TDRD3Q9H7E2 651 aaKnown RBP18.13■□□□□ 0.49
SPAST-202ENST00000345662 SHOC2Q9UQ13 582 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 STARD13Q9Y3M8 1113 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 KPNA4O00629 521 aaPredicted RBP18.13■□□□□ 0.49
SPAST-202ENST00000345662 RAG1P15918 1043 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 ARPP19P56211 112 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 RNF43Q68DV7 783 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 KYQ8NBH2 561 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 WDR60Q8WVS4 1066 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 ZNF556Q9HAH1 456 aa18.13■□□□□ 0.49
SPAST-202ENST00000345662 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.13■□□□□ 0.49
SPAST-202ENST00000345662 KYAT1Q16773 422 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 KDELC2Q7Z4H8 507 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 CROCCP3Q8IVE0 287 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 DAPK2Q9UIK4 370 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 CAB39Q9Y376 341 aaPredicted RBP18.12■□□□□ 0.49
SPAST-202ENST00000345662 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 FKBP9O95302 570 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 BCL10O95999 233 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 PRKCBP05771 671 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 ATP6V1C1P21283 382 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 BOLA3Q53S33 107 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 GJC2Q5T442 439 aaPredicted RBP18.12■□□□□ 0.49
SPAST-202ENST00000345662 ZNF662Q6ZS27 426 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 FKBP9P1Q75LS8 142 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 EFL1Q7Z2Z2 1120 aaKnown RBP18.12■□□□□ 0.49
SPAST-202ENST00000345662 TUBGCP3Q96CW5 907 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 KIF12Q96FN5 646 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 C17orf80Q9BSJ5 609 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 RUSC1Q9BVN2 902 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 TRIM54Q9BYV2 358 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 UTP6Q9NYH9 597 aaKnown RBP18.12■□□□□ 0.49
SPAST-202ENST00000345662 AKAP3O75969 853 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 OCM2P0CE71 109 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 OCMP0CE72 109 aaPredicted RBP18.12■□□□□ 0.49
SPAST-202ENST00000345662 FDFT1P37268 417 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 RBBP8Q99708 897 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 TMEM121Q9BTD3 319 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 DCLK3Q9C098 648 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 NIF3L1Q9GZT8 377 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 COL15A1P39059 1388 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 FAM237AA0A1B0GTK4 181 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 SLCO1B7G3V0H7 640 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 GRAP2O75791 330 aa18.12■□□□□ 0.49
SPAST-202ENST00000345662 RAD17O75943 681 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms