RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CYP4A22Q5TCH4 519 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 POTEGQ6S5H5 508 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 TRAPPC3O43617 180 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 BCAP31P51572 246 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 USP39Q53GS9 565 aaKnown RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 NSUN6Q8TEA1 469 aaKnown RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 COMMD8Q9NX08 183 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 TPP2P29144 1249 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 BTBD8Q5XKL5 378 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 CDC73Q6P1J9 531 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 ANKS1AQ92625 1134 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 VAV3Q9UKW4 847 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 KLHL17Q6TDP4 642 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 MCEEQ96PE7 176 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 FHDC1Q9C0D6 1143 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 STOML2Q9UJZ1 356 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 PCDHA6Q9UN73 950 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 PCDHA8Q9Y5H6 950 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 TAF4O00268 1085 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 FAM200BP0CF97 657 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 ITGA8P53708 1063 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 UBXN2AP68543 259 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 UBE2SQ16763 222 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 ZCCHC7Q8N3Z6 543 aaKnown RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 PDCD10Q9BUL8 212 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 KIAA0408Q6ZU52 694 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 CAVIN3Q969G5 261 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 SLC16A2P36021 539 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 PPP3CCP48454 512 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 SESN2P58004 480 aaPredicted RBP20.08■□□□□ 0.81
HDAC4-201ENST00000345617 TFDP3Q5H9I0 405 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 ARID3BQ8IVW6 561 aaPredicted RBP20.08■□□□□ 0.81
HDAC4-201ENST00000345617 MPP4Q96JB8 637 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 ARMC7Q9H6L4 198 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 NRDE2Q9H7Z3 1164 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 AVENQ9NQS1 362 aaPredicted RBP20.08■□□□□ 0.81
HDAC4-201ENST00000345617 TPRKBQ9Y3C4 175 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 PCDHB2Q9Y5E7 798 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 H3BMM5 538 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 TTLL9Q3SXZ7 439 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 A0A087WXM4 84 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 WEE2P0C1S8 567 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 IZUMO2Q6UXV1 221 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 KRT77Q7Z794 578 aa20.08■□□□□ 0.81
HDAC4-201ENST00000345617 NARS2Q96I59 477 aaKnown RBP20.08■□□□□ 0.81
HDAC4-201ENST00000345617 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.08■□□□□ 0.81
HDAC4-201ENST00000345617 CPDO75976 1380 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 TEX28O15482 410 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 PLEKHA8P1O95397 391 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 ATP6V1G2O95670 118 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 GRIK1P39086 918 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 RGS21Q2M5E4 152 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 TBC1D10BQ4KMP7 808 aaPredicted RBP20.08■□□□□ 0.8
HDAC4-201ENST00000345617 RORBQ92753 470 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 MKNK1Q9BUB5 465 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 USP17L3A6NCW0 530 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 USP17L4A6NCW7 530 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 KIZQ2M2Z5 673 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 B3GNT6Q6ZMB0 384 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 USP17L1Q7RTZ2 530 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 METTL16Q86W50 562 aaKnown RBP20.08■□□□□ 0.8
HDAC4-201ENST00000345617 IFNEQ86WN2 208 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 CCDC33Q8N5R6 958 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 OSCP1Q8WVF1 389 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 SLC10A4Q96EP9 437 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 RGS18Q9NS28 235 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 AFF4Q9UHB7 1163 aaKnown RBP20.08■□□□□ 0.8
HDAC4-201ENST00000345617 SNX13Q9Y5W8 968 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 ANXA9O76027 345 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 RHOBTB3O94955 611 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 JPH1Q9HDC5 661 aaPredicted RBP20.08■□□□□ 0.8
HDAC4-201ENST00000345617 PALLDQ8WX93 1383 aa20.08■□□□□ 0.8
HDAC4-201ENST00000345617 DPYDQ12882 1025 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 ERO1BQ86YB8 467 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 NMD3Q96D46 503 aaKnown RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 STRBPQ96SI9 672 aaKnown RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 KIFC1Q9BW19 673 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 NCKIPSDQ9NZQ3 722 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 GGT7Q9UJ14 662 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 SPDYCQ5MJ68 293 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 LRRC74BQ6ZQY2 392 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 C15orf41Q9Y2V0 281 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 EYA4O95677 639 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 TFB1MQ8WVM0 346 aaKnown RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 TRIM51Q9BSJ1 452 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 C9orf16Q9BUW7 83 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 ADGRA2Q96PE1 1338 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 VPS4BO75351 444 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 ANXA6P08133 673 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 NAIF1Q69YI7 327 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 C6orf62Q9GZU0 229 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 HIST2H2ACQ16777 129 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 COBLL1Q53SF7 1204 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 HIST2H2AA3Q6FI13 130 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 ZBTB49Q6ZSB9 765 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 DDX17Q92841 729 aaKnown RBP20.07■□□□□ 0.8
HDAC4-201ENST00000345617 HDHD2Q9H0R4 259 aa20.07■□□□□ 0.8
HDAC4-201ENST00000345617 RASA2Q15283 850 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms