RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 PCDHB5Q9Y5E4 795 aa23.37■■□□□ 1.33
RBM38-201ENST00000342690 PCDHB4Q9Y5E5 795 aa23.37■■□□□ 1.33
RBM38-201ENST00000342690 FHOD1Q9Y613 1164 aa23.37■■□□□ 1.33
RBM38-201ENST00000342690 C2orf16Q68DN1 1984 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 GOLGA6L3A6NEY3 463 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 PTPN1P18031 435 aaKnown RBP23.36■■□□□ 1.33
RBM38-201ENST00000342690 HOXA9P31269 272 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 POLR2FP61218 127 aaKnown RBP23.36■■□□□ 1.33
RBM38-201ENST00000342690 ITIH3Q06033 890 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 PTPN21Q16825 1174 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 MDH1BQ5I0G3 518 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 DPY19L2P1Q6NXN4 242 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 RTL10Q7L3V2 364 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 UBR7Q8N806 425 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 B3GALNT2Q8NCR0 500 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 NT5C1AQ9BXI3 368 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 PRKD2Q9BZL6 878 aa23.36■■□□□ 1.33
RBM38-201ENST00000342690 USP15Q9Y4E8 981 aaPredicted RBP23.36■■□□□ 1.33
RBM38-201ENST00000342690 CCL16O15467 120 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 SOAT2O75908 522 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 NOL4O94818 638 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 HNRNPA1P09651 372 aaKnown RBP eCLIP23.35■■□□□ 1.33
RBM38-201ENST00000342690 PBX1P40424 430 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 KCNQ1P51787 676 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 SMYD5Q6GMV2 418 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 CACNA2D4Q7Z3S7 1137 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 GPR149Q86SP6 731 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 ACOT1Q86TX2 421 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 MYCBPAPQ8TBZ2 947 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 ATXN2LQ8WWM7 1075 aaKnown RBP23.35■■□□□ 1.33
RBM38-201ENST00000342690 PCED1BQ96HM7 432 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 ELOVL4Q9GZR5 314 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 HSFX1Q9UBD0 423 aa23.35■■□□□ 1.33
RBM38-201ENST00000342690 PTPRDP23468 1912 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 LRG1P02750 347 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 HAPLN1P10915 354 aaPredicted RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 KRT5P13647 590 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 MRPS5P82675 430 aaKnown RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 TWF1Q12792 350 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 MAPRE1Q15691 268 aaKnown RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 AAK1Q2M2I8 961 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 MGAT5BQ3V5L5 792 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 ZNF394Q53GI3 561 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 PTCRAQ6ISU1 281 aaPredicted RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 CES5AQ6NT32 575 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 TMEM270Q6UE05 265 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 SPATA2LQ8IUW3 424 aaPredicted RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 CRYBG2Q8N1P7 616 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 SUSD6Q92537 303 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 SMG7Q92540 1137 aaKnown RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 IQCDQ96DY2 449 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 SEPT5Q99719 369 aaPredicted RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 NUP58Q9BVL2 599 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 RHOBTB2Q9BYZ6 727 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 CEP72Q9P209 647 aa23.34■■□□□ 1.33
RBM38-201ENST00000342690 AJAP1Q9UKB5 411 aaPredicted RBP23.34■■□□□ 1.33
RBM38-201ENST00000342690 EPHB6O15197 1021 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 AP5Z1O43299 807 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 POU2F2P09086 479 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 ACO1P21399 889 aaKnown RBP23.33■■□□□ 1.33
RBM38-201ENST00000342690 USP8P40818 1118 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 CYP27A1Q02318 531 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 DRAP1Q14919 205 aaPredicted RBP23.33■■□□□ 1.33
RBM38-201ENST00000342690 C4orf50Q6ZRC1 276 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.33■■□□□ 1.332e-6■■■■■ 28.3
RBM38-201ENST00000342690 RBBP8NLQ8NC74 664 aaPredicted RBP23.33■■□□□ 1.33
RBM38-201ENST00000342690 SHC3Q92529 594 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 TMEM176AQ96HP8 235 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 FUBP3Q96I24 572 aaKnown RBP eCLIP23.33■■□□□ 1.33
RBM38-201ENST00000342690 SPAG5Q96R06 1193 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 NAA15Q9BXJ9 866 aaKnown RBP23.33■■□□□ 1.33
RBM38-201ENST00000342690 STK33Q9BYT3 514 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 ABCB6Q9NP58 842 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 NLRC4Q9NPP4 1024 aa23.33■■□□□ 1.33
RBM38-201ENST00000342690 ITIH6Q6UXX5 1313 aa23.33■■□□□ 1.32
RBM38-201ENST00000342690 IL9P15248 144 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 CYP2F1P24903 491 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 TUFMP49411 452 aaKnown RBP23.32■■□□□ 1.32
RBM38-201ENST00000342690 ZNF75DP51815 510 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 RAD23BP54727 409 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 PUS10Q3MIT2 529 aaKnown RBP23.32■■□□□ 1.32
RBM38-201ENST00000342690 CFAP221Q4G0U5 840 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 CYP26C1Q6V0L0 522 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 ASB2Q96Q27 587 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 B3GNT5Q9BYG0 378 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 PIDD1Q9HB75 910 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.32■■□□□ 1.32
RBM38-201ENST00000342690 DENND4AQ7Z401 1863 aa23.32■■□□□ 1.32
RBM38-201ENST00000342690 XIRP2A4UGR9 3374 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 CLDN5O00501 218 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 XYLBO75191 536 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 PAEPP09466 180 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 ATF6P18850 670 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 BDNFP23560 247 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 MTHFRP42898 656 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 GPR15P49685 360 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 PLD1Q13393 1074 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 CBX2Q14781 532 aaPredicted RBP23.31■■□□□ 1.32
RBM38-201ENST00000342690 FIGNQ5HY92 759 aa23.31■■□□□ 1.32
RBM38-201ENST00000342690 ATAT1Q5SQI0 421 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms