RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 TMEM59LQ9UK28 342 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SNX9Q9Y5X1 595 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SOBPA7XYQ1 873 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PALMO75781 387 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 ENDOD1O94919 500 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 MOCS3O95396 460 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CETN2P41208 172 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PAFAH1B1P43034 410 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 ARID5AQ03989 594 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 TLE2Q04725 743 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PDCLQ13371 301 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 MAMLD1Q13495 774 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 TAZQ16635 292 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 TRIM60Q495X7 471 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SYDE1Q6ZW31 735 aaPredicted RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 PEX26Q7Z412 305 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 BNIPLQ7Z465 357 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 ARHGAP18Q8N392 663 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 B3GALNT2Q8NCR0 500 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SP7Q8TDD2 431 aaPredicted RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 GOLGA1Q92805 767 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SLCO2A1Q92959 643 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PGAP3Q96FM1 320 aaPredicted RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 SMARCD1Q96GM5 515 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 C8orf48Q96LL4 319 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SAMD11Q96NU1 681 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 ZSWIM1Q9BR11 485 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 MRPL45Q9BRJ2 306 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 CTTNBP2NLQ9P2B4 639 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 RCOR3Q9P2K3 495 aaPredicted RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 NXF1Q9UBU9 619 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 LZTS1Q9Y250 596 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CAPN6Q9Y6Q1 641 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SCN1AP35498 2009 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.2
NUP43-201ENST00000340413 DDX3YO15523 660 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 TBC1D4O60343 1298 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 DAB1O75553 588 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PFKLP17858 780 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PTPN1P18031 435 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 SCNN1GP51170 649 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CBLBQ13191 982 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CCDC70Q6NSX1 233 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 DNAJC24Q6P3W2 148 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 DSTYKQ6XUX3 929 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 XYLT1Q86Y38 959 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CNPY4Q8N129 248 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 WDTC1Q8N5D0 677 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CYFIP2Q96F07 1278 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 RBM41Q96IZ5 413 aaKnown RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 SPATA17Q96L03 361 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 FAM193BQ96PV7 902 aaPredicted RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 PPP1R16BQ96T49 567 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 SLC9A7Q96T83 725 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 IRX2Q9BZI1 471 aaPredicted RBP7.58□□□□□ -1.2
NUP43-201ENST00000340413 SLITRK6Q9H5Y7 841 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 CNGB3Q9NQW8 809 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 AAASQ9NRG9 546 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 TBC1D13Q9NVG8 400 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 IL37Q9NZH6 218 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 GINS2Q9Y248 185 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 PTPRSQ13332 1948 aa7.58□□□□□ -1.2
NUP43-201ENST00000340413 A8MXQ7 604 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 BHMG1C9JSJ3 638 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 TRIM66O15016 1216 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 CSDE1O75534 798 aaKnown RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 PAPLNO95428 1278 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 TSPY1Q01534 308 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 CYP1B1Q16678 543 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 NAA35Q5VZE5 725 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 CDR2LQ86X02 465 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 RHOT1Q8IXI2 618 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 EXD1Q8NHP7 514 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 TFAP2BQ92481 460 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 ZNF668Q96K58 619 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 HEXIM2Q96MH2 286 aaKnown RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 SYT15Q9BQS2 421 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.57□□□□□ -1.2
NUP43-201ENST00000340413 TMEM39AQ9NV64 488 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 SPTLC1O15269 473 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 TADA3O75528 432 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 DGKIO75912 1065 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 KRT7P08729 469 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 NPR3P17342 541 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 HTRA4P83105 476 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 NNTQ13423 1086 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 GOLGA7BQ2TAP0 167 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 DRICH1Q6PGQ1 229 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 STRADAQ7RTN6 431 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 ABI1Q8IZP0 508 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 GPR161Q8N6U8 529 aaKnown RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 CENPIQ92674 756 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 TOP1MTQ969P6 601 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 MMS19Q96T76 1030 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 PACSIN1Q9BY11 444 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 MIOSQ9NXC5 875 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 TSPAN16Q9UKR8 245 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 RAD54BQ9Y620 910 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 CTAGE15A4D2H0 777 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 MYO1FO00160 1098 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms