RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 ZFP42Q96MM3 310 aa16.08■□□□□ 0.16
TUBB4B-201ENST00000340384 TSPAN18Q96SJ8 248 aa16.08■□□□□ 0.16
TUBB4B-201ENST00000340384 DDX47Q9H0S4 455 aaKnown RBP16.08■□□□□ 0.16
TUBB4B-201ENST00000340384 CEP290O15078 2479 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 FAM170AA1A519 330 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 PTGESO14684 152 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 PSTPIP1O43586 416 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 CAPN15O75808 1086 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 EOMESO95936 686 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 CALCAP01258 141 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 FGBP02675 491 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 FGFR1P11362 822 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 MMP8P22894 467 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 CETN2P41208 172 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 GATMP50440 423 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 RAB27AP51159 221 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 WDR5P61964 334 aaKnown RBP16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 ZNF211Q13398 564 aaPredicted RBP16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 WDR72Q3MJ13 1102 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 SCARA5Q6ZMJ2 495 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 MMS22LQ6ZRQ5 1243 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 CASKIN2Q8WXE0 1202 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 KRT35Q92764 455 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 SNX27Q96L92 541 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 RUFY1Q96T51 708 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 ELAC1Q9H777 363 aaKnown RBP16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 TMEM161AQ9NX61 479 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 IP6K2Q9UHH9 426 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 NR2E3Q9Y5X4 410 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 TTC3P53804 2025 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 MICAL3Q7RTP6 2002 aa16.07■□□□□ 0.16
TUBB4B-201ENST00000340384 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 H0YGN5 161 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 HSF2BPO75031 334 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 WEE2P0C1S8 567 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 ITGA4P13612 1032 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 DR1Q01658 176 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 MYO1EQ12965 1108 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 HLTFQ14527 1009 aaKnown RBP eCLIP16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 ZBTB6Q15916 424 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 C9orf50Q5SZB4 431 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 RHOT1Q8IXI2 618 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 MREGQ8N565 214 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 RNF169Q8NCN4 708 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 FEZF2Q8TBJ5 459 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 TOP1MTQ969P6 601 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 BTBD6Q96KE9 485 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 GAD1Q99259 594 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 DPP3Q9NY33 737 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 CHORDC1Q9UHD1 332 aaPredicted RBP16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 SIX4Q9UIU6 781 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 NFU1Q9UMS0 254 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 COL4A6Q14031 1691 aa16.06■□□□□ 0.16
TUBB4B-201ENST00000340384 ARL5CA6NH57 179 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 BHMG1C9JSJ3 638 aaPredicted RBP16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 INPPL1O15357 1258 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 OPA1O60313 960 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 CD19P15391 556 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 BRD2P25440 801 aaKnown RBP16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 MLH1P40692 756 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 CARSP49589 748 aaKnown RBP16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 MRPS25P82663 173 aaKnown RBP16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 DNAJC24Q6P3W2 148 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 ERICH1Q86X53 443 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 SLC13A5Q86YT5 568 aaPredicted RBP16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 HERVK_113Q902F9 699 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 KIF12Q96FN5 646 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 HPDLQ96IR7 371 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 GDF15Q99988 308 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 LBHD1Q9BQE6 289 aaPredicted RBP16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 DNAI2Q9GZS0 605 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 CNTN3Q9P232 1028 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 AMACRQ9UHK6 382 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 KIAA1257Q9ULG3 409 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 POLIQ9UNA4 740 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 GIT1Q9Y2X7 761 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 SMIM28A0A1B0GU29 152 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 PODXLO00592 558 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 B4GALT3O60512 393 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 BAIAP3O94812 1187 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 SKIP12755 728 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 MARCKSL1P49006 195 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 ZNF394Q53GI3 561 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 GLRA4Q5JXX5 417 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 BEST2Q8NFU1 509 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 CXorf38Q8TB03 319 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 LRRC45Q96CN5 670 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 PKNOX2Q96KN3 472 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 CASD1Q96PB1 797 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 RSAD1Q9HA92 442 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 HOMER3Q9NSC5 361 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 WDR35Q9P2L0 1181 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 AGAP1Q9UPQ3 857 aa16.05■□□□□ 0.16
TUBB4B-201ENST00000340384 POLR3GO15318 223 aaPredicted RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 XPOTO43592 962 aaKnown RBP16.04■□□□□ 0.16
TUBB4B-201ENST00000340384 PYGMP11217 842 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms