RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 APOPT1Q96IL0 206 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 ERGIC2Q96RQ1 377 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 TLR10Q9BXR5 811 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 C1orf21Q9H246 121 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 NDFIP2Q9NV92 336 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 TMEM59LQ9UK28 342 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 DOLKQ9UPQ8 538 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 CLEC11AQ9Y240 323 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 ZHX2Q9Y6X8 837 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 CENPXA8MT69 81 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 SCO2O43819 266 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 ADAM23O75077 832 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 SLC5A3P53794 718 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 MRPS9P82933 396 aaKnown RBP4.33□□□□□ -1.72
NEDD4-201ENST00000338963 FMR1Q06787 632 aaKnown RBP eCLIP4.33□□□□□ -1.72
NEDD4-201ENST00000338963 TARDBPQ13148 414 aaKnown RBP eCLIP4.33□□□□□ -1.72
NEDD4-201ENST00000338963 APOFQ13790 326 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 AUHQ13825 339 aaKnown RBP4.33□□□□□ -1.72
NEDD4-201ENST00000338963 NAB2Q15742 525 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 UBL4BQ8N7F7 174 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 INPP4AQ96PE3 977 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-201ENST00000338963 RBM14Q96PK6 669 aaKnown RBP4.33□□□□□ -1.72
NEDD4-201ENST00000338963 C20orf96Q9NUD7 363 aaPredicted RBP4.33□□□□□ -1.72
NEDD4-201ENST00000338963 TAS2R7Q9NYW3 318 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 PLAGL2Q9UPG8 496 aa4.33□□□□□ -1.72
NEDD4-201ENST00000338963 URB2Q14146 1524 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 MYO3BQ8WXR4 1341 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ZNF185O15231 689 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 MAP3K13O43283 966 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ZPR1O75312 459 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 DNAJB5O75953 348 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 WDPCPO95876 746 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 RBP3P10745 1247 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 IMPDH1P20839 514 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SLC5A2P31639 672 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ENTPD1P49961 510 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 NCKAP1LP55160 1127 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 PTH1RQ03431 593 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 LGALS3BPQ08380 585 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 KCNMA1Q12791 1236 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 PPP2R5CQ13362 524 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 UAP1Q16222 522 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 FBXO43Q4G163 708 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 EARS2Q5JPH6 523 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ANKRD40Q6AI12 368 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 LUZP2Q86TE4 346 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 PIAS4Q8N2W9 510 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 RBM15BQ8NDT2 890 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 TPCN2Q8NHX9 752 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SPATA20Q8TB22 786 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SCFD2Q8WU76 684 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 MCRS1Q96EZ8 462 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 WNK4Q96J92 1243 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 DDX50Q9BQ39 737 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 GCOM2Q9BZD3 368 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 RTCBQ9Y3I0 505 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ABCC6O95255 1503 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SYCP2Q9BX26 1530 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 VILLO15195 856 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SHOXO15266 292 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 TLR2O60603 784 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 GABBR2O75899 941 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 MYO1DO94832 1006 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 MYL6BP14649 208 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 KCNA6P17658 529 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 CASP2P42575 452 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 TPTEP56180 551 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 AP1S2P56377 157 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 RAB4BP61018 213 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 CDK16Q00536 496 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 KLHL30Q0D2K2 578 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 NFIAQ12857 509 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 NPTX1Q15818 432 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ARHGAP44Q17R89 818 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ACSBG2Q5FVE4 666 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 UGT2A3Q6UWM9 527 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 KCTD20Q7Z5Y7 419 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ADGRF2Q8IZF7 708 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 EXD1Q8NHP7 514 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 DTX3LQ8TDB6 740 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 CHAC2Q8WUX2 184 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 UTP4Q969X6 686 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SLC7A6OSQ96CW6 309 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 PAWRQ96IZ0 340 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 TM9SF2Q99805 663 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 DPEP3Q9H4B8 488 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 EBF3Q9H4W6 596 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 FANCEQ9HB96 536 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 TUFT1Q9NNX1 390 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 RPRD1BQ9NQG5 326 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 GPRC5DQ9NZD1 345 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 ARMCX3Q9UH62 379 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SLC4A4Q9Y6R1 1079 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 RNF17Q9BXT8 1623 aaKnown RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 SYNJ2BP-COX16A0A087WUM0 186 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 RBAK-RBAKDNI3L0D1 243 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 KCNK3O14649 394 aa4.32□□□□□ -1.72
NEDD4-201ENST00000338963 IRS4O14654 1257 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-201ENST00000338963 NOS1APO75052 506 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms