RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GRHL1Q9NZI5 618 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 LRP5O75197 1615 aa8.63□□□□□ -1.03
HPS4-201ENST00000336873 H0YCG3 227 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 PIK3CDO00329 1044 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 SUPT20HL2P0C7V6 817 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 EPHB2P29323 1055 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 ECHS1P30084 290 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 SDC4P31431 198 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 ARFIP2P53365 341 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 ZRSR2Q15696 482 aaKnown RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 RWDD4Q6NW29 188 aaKnown RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 TRMT10CQ7L0Y3 403 aaKnown RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 BBOF1Q8ND07 529 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 PPFIBP2Q8ND30 876 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 RUBCNQ92622 972 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 EXT2Q93063 718 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 FAM81BQ96LP2 452 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 MECRQ9BV79 373 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 PTPRJQ12913 1337 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 DHX15O43143 795 aaKnown RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 MOCS2O96007 188 aaPredicted RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 CALB1P05937 261 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 PYGBP11216 843 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 ACAT1P24752 427 aaKnown RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 ARPP19P56211 112 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 BMT2Q1RMZ1 405 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 TREML2Q5T2D2 321 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 DPY19L2Q6NUT2 758 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 ARMC9Q7Z3E5 817 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 MAP7D3Q8IWC1 876 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 TCP10LQ8TDR4 215 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 USP6NLQ92738 828 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 GPR88Q9GZN0 384 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 RNF181Q9P0P0 153 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 HEY2Q9UBP5 337 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 SLC12A6Q9UHW9 1150 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 CACNA1SQ13698 1873 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 TRIM49D1C9J1S8 452 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 H3BRJ5 948 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 IRF6O14896 467 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 DYNC1LI2O43237 492 aaPredicted RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 ENTPD5O75356 428 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 SRGAP2BP0DMP2 458 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 PTPRAP18433 802 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 BGNP21810 368 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 RFX1P22670 979 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 TBXAS1P24557 533 aaPredicted RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 ROR1Q01973 937 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 LAMTOR4Q0VGL1 99 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 TAF1BQ53T94 588 aaPredicted RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 C16orf46Q6P387 395 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 SPOCD1Q6ZMY3 1216 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 RYBPQ8N488 228 aaPredicted RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 PPP4R1Q8TF05 950 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 AGAP11Q8TF27 550 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 HASPINQ8TF76 798 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 FIZ1Q96SL8 496 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 TRIM55Q9BYV6 548 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 IFT122Q9HBG6 1241 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 CYP39A1Q9NYL5 469 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 CACNG4Q9UBN1 327 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 ZC3H7BQ9UGR2 993 aaKnown RBP8.62□□□□□ -1.03
HPS4-201ENST00000336873 UBIAD1Q9Y5Z9 338 aa8.62□□□□□ -1.03
HPS4-201ENST00000336873 SHOX2O60902 331 aaPredicted RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 DGKIO75912 1065 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 KRT16P08779 473 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 TCN1P20061 433 aaPredicted RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 UBA1P22314 1058 aaKnown RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 ELK3P41970 407 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 FNTAP49354 379 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 POLE2P56282 527 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 SLC39A4Q6P5W5 647 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 BTNL9Q6UXG8 535 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 PID1Q7Z2X4 250 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 DOT1LQ8TEK3 1739 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 SGF29Q96ES7 293 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 HPDLQ96IR7 371 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 PAFAH2Q99487 392 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 OSBPL1AQ9BXW6 950 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 FBXO6Q9NRD1 293 aaPredicted RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 NOCTQ9UK39 431 aaKnown RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 NUDT5Q9UKK9 219 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 ANKRD36CQ5JPF3 1778 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 LTBP4Q8N2S1 1624 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 ZNF536O15090 1300 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 IRS2Q9Y4H2 1338 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 KCNK1O00180 336 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 PPP1R12AO14974 1030 aaPredicted RBP8.61□□□□□ -1.03
HPS4-201ENST00000336873 SNX3O60493 162 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 MT-CO1P00395 513 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 NFICP08651 508 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 P4HA1P13674 534 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 GDF10P55107 478 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 SLC8A3P57103 927 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 COPS2P61201 443 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 CAPSQ13938 189 aa8.61□□□□□ -1.03
HPS4-201ENST00000336873 NFIL3Q16649 462 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms