RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FAM237BA0A1B0GVD1 139 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 BGNP21810 368 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 MCL1Q07820 350 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 MFSD7Q6UXD7 560 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 KATNAL2Q8IYT4 538 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 ATP11CQ8NB49 1132 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 NLGN2Q8NFZ4 835 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 FAM192AQ9GZU8 254 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 VPS11Q9H270 941 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 C10orf88Q9H8K7 445 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 NDE1Q9NXR1 346 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 ATRNL1Q5VV63 1379 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 RBM47A0AV96 593 aaKnown RBP14.4□□□□□ -0.1
SYNE3-201ENST00000334258 CAPN15O75808 1086 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 UNGP13051 313 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-201ENST00000334258 ETS2P15036 469 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 ADSSP30520 456 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 GPC3P51654 580 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 ARL4CP56559 192 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 EAPPQ56P03 285 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-201ENST00000334258 C1orf146Q5VVC0 180 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 USP37Q86T82 979 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 NIM1KQ8IY84 436 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 IFT43Q96FT9 208 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 NMUR2Q9GZQ4 415 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 ASCC2Q9H1I8 757 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-201ENST00000334258 TCEAL9Q9UHQ7 104 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 PCDHB2Q9Y5E7 798 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 DNAH12Q6ZR08 3092 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 DSG1Q02413 1049 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 GAD2Q05329 585 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 DBN1Q16643 649 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 WDR72Q3MJ13 1102 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-201ENST00000334258 NLRX1Q86UT6 975 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 SLC25A41Q8N5S1 370 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 SMC1BQ8NDV3 1235 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 OXNAD1Q96HP4 312 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-201ENST00000334258 RBM41Q96IZ5 413 aaKnown RBP14.4□□□□□ -0.1
SYNE3-201ENST00000334258 CLPTM1LQ96KA5 538 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 IWS1Q96ST2 819 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 PHACTR1Q9C0D0 580 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 EHMT1Q9H9B1 1298 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 FBXO28Q9NVF7 368 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 PIM2Q9P1W9 311 aa14.4□□□□□ -0.1
SYNE3-201ENST00000334258 GPX6P59796 221 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 WDR44Q5JSH3 913 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 ALYREFQ86V81 257 aaKnown RBP14.39□□□□□ -0.11
SYNE3-201ENST00000334258 TUBGCP5Q96RT8 1024 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 DMAP1Q9NPF5 467 aaPredicted RBP14.39□□□□□ -0.11
SYNE3-201ENST00000334258 EXOC7Q9UPT5 735 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 TM9SF1O15321 606 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 GLRA2P23416 452 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 TMEM179Q6ZVK1 233 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 ALLCQ8N6M5 410 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 JDP2Q8WYK2 163 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 NDNQ99608 321 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 CENPKQ9BS16 269 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 PPCSQ9HAB8 311 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 RABGEF1Q9UJ41 708 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 SMCHD1A6NHR9 2005 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 UMODL1Q5DID0 1318 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 CREB3O43889 395 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 KITP10721 976 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 RARBP10826 455 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 ANPEPP15144 967 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 PSMC4P43686 418 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 AP2B1P63010 937 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 MAMLD1Q13495 774 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 EFHC2Q5JST6 749 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 CC2D2BQ6DHV5 1058 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 C12orf56Q8IXR9 622 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 RCOR2Q8IZ40 523 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 ARHGAP18Q8N392 663 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 RILPQ96NA2 401 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 SAE1Q9UBE0 346 aaPredicted RBP14.39□□□□□ -0.11
SYNE3-201ENST00000334258 ZNF70Q9UC06 446 aaPredicted RBP14.39□□□□□ -0.11
SYNE3-201ENST00000334258 MARCOQ9UEW3 520 aaPredicted RBP14.39□□□□□ -0.11
SYNE3-201ENST00000334258 ZHX2Q9Y6X8 837 aa14.39□□□□□ -0.11
SYNE3-201ENST00000334258 MYPNQ86TC9 1320 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 A8MXQ7 604 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 USP1O94782 785 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 P4HBP07237 508 aaKnown RBP14.38□□□□□ -0.11
SYNE3-201ENST00000334258 TCF4P15884 667 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 DSG3P32926 999 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 GSTA3Q16772 222 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 KLHL38Q2WGJ6 581 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 CNPY1Q3B7I2 92 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 RNASEH2BQ5TBB1 312 aaKnown RBP14.38□□□□□ -0.11
SYNE3-201ENST00000334258 SCUBE1Q8IWY4 988 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 FBXO36Q8NEA4 188 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 AGTPBP1Q9UPW5 1226 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 IVNS1ABPQ9Y6Y0 642 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 ARHGAP42A6NI28 874 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 I3L4J1 428 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 CFHP08603 1231 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 TNNI1P19237 187 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms