RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 BICD1Q96G01 975 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 RPGRIP1Q96KN7 1286 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 ZMAT2Q96NC0 199 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 PLIN2Q99541 437 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 PAAF1Q9BRP4 392 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 RPF1Q9H9Y2 349 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 KBTBD4Q9NVX7 518 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 ANKFY1Q9P2R3 1169 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 HSFX1Q9UBD0 423 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 MUTYHQ9UIF7 546 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 CPSF3Q9UKF6 684 aaKnown RBP6.87□□□□□ -1.31
SMG1-201ENST00000330588 CFAP45Q9UL16 551 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 KCNH3Q9ULD8 1083 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 TRIP11Q15643 1979 aa6.87□□□□□ -1.31
SMG1-201ENST00000330588 NPHP3-ACAD11A0A0J9YXS1 232 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 TMEM221A6NGB7 291 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 MYMKA6NI61 221 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 M0R296 226 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 EIF3DO15371 548 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMG1-201ENST00000330588 MEFVO15553 781 aaPredicted RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 OAZ2O95190 189 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 F13A1P00488 732 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 TYMPP19971 482 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 STAT6P42226 847 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 EIF1AXP47813 144 aaKnown RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 STK38Q15208 465 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 GLRA4Q5JXX5 417 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 PERM1Q5SV97 790 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 LIN9Q5TKA1 542 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 SPATA1Q5VX52 437 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ZNF280DQ6N043 979 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 SLC39A4Q6P5W5 647 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 TMC5Q6UXY8 1006 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 USP49Q70CQ1 688 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 SFR1Q86XK3 245 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 CCDC65Q8IXS2 484 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 TCEAL8Q8IYN2 117 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 LEMD2Q8NC56 503 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 C3orf58Q8NDZ4 430 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 SPATA18Q8TC71 538 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 SMG7Q92540 1137 aaKnown RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 TP53INP1Q96A56 240 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ASIC4Q96FT7 647 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 IFT43Q96FT9 208 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ZBTB45Q96K62 511 aaPredicted RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 CLIC6Q96NY7 704 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ACCSQ96QU6 501 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 HAPLN2Q9GZV7 340 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 IRF2BPLQ9H1B7 796 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 TMEM206Q9H813 350 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 POLD4Q9HCU8 107 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 CGNQ9P2M7 1197 aaKnown RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 USP25Q9UHP3 1055 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 UBE4BO95155 1302 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ANK1P16157 1881 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 PVALEFA0A1B0GWK0 134 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ANO9A1A5B4 782 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 OR6C75A6NL08 312 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 CYP11A1P05108 521 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 MYL1P05976 194 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 HSP90AA1P07900 732 aaKnown RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 CXCL8P10145 99 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 CPB1P15086 417 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ATF2P15336 505 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 TKTP29401 623 aaKnown RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 PLA2G5P39877 138 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ARSDP51689 593 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 GPLD1P80108 840 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 PLAURQ03405 335 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 SMARCB1Q12824 385 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 MYBPC2Q14324 1141 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 PPM1LQ5SGD2 360 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 AXDND1Q5T1B0 1012 aaPredicted RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 PRSS55Q6UWB4 352 aaPredicted RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 ATCAYQ86WG3 371 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 FBXL6Q8N531 539 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 C12orf76Q8N812 135 aaPredicted RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 IQUBQ8NA54 791 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 TMEM174Q8WUU8 243 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 MSTO1Q9BUK6 570 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 CXCL16Q9H2A7 254 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 AGO2Q9UKV8 859 aaKnown RBP6.86□□□□□ -1.31
SMG1-201ENST00000330588 DSEQ9UL01 958 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 DUSP12Q9UNI6 340 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 NUB1Q9Y5A7 615 aa6.86□□□□□ -1.31
SMG1-201ENST00000330588 KMT2EQ8IZD2 1858 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 TSC2P49815 1807 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 A0A087X0B3 334 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 LACTBL1A8MY62 500 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 ANHXE9PGG2 379 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 C8AP07357 584 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 NMT1P30419 496 aaKnown RBP6.85□□□□□ -1.31
SMG1-201ENST00000330588 MCM4P33991 863 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 OR1D2P34982 312 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 PNPLA4P41247 253 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 MATR3P43243 847 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMG1-201ENST00000330588 BRCC3P46736 316 aa6.85□□□□□ -1.31
SMG1-201ENST00000330588 OSTNP61366 133 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms