RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 KDM1AO60341 852 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 SPP2Q13103 211 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 SURF1Q15526 300 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 GRIK5Q16478 980 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 CDKL3Q8IVW4 592 aaPredicted RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 CATSPER1Q8NEC5 780 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 USP13Q92995 863 aaPredicted RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 ZMAT2Q96NC0 199 aaKnown RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 DCUN1D5Q9BTE7 237 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 GPATCH2LQ9NWQ4 482 aa14.64□□□□□ -0.07
EPHB3-201ENST00000330394 ATXN2Q99700 1313 aaKnown RBP14.64□□□□□ -0.07
EPHB3-201ENST00000330394 PSTPIP1O43586 416 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 PROCP04070 461 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 ADORA2BP29275 332 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 DRG2P55039 364 aaKnown RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 PLOD1Q02809 727 aaPredicted RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 NPY5RQ15761 445 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 SLC45A4Q5BKX6 768 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 POTEAQ6S8J7 498 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 SPOCD1Q6ZMY3 1216 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 C4orf50Q6ZRC1 276 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 MRPL1Q9BYD6 325 aaKnown RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 NACA2Q9H009 215 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 KCND2Q9NZV8 630 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 PAK5Q9P286 719 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 IVNS1ABPQ9Y6Y0 642 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 KPNA2P52292 529 aaKnown RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 BNIP1Q12981 228 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 RNF43Q68DV7 783 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 KLC3Q6P597 504 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 APLFQ8IW19 511 aaPredicted RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 ZNF786Q8N393 782 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 EXD1Q8NHP7 514 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 PSPC1Q8WXF1 523 aaKnown RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 RTFDC1Q9BY42 306 aaPredicted RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 HERC5Q9UII4 1024 aaKnown RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 IGSF9BQ9UPX0 1349 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 PEX1O43933 1283 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 KCNA4P22459 653 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 GSCP56915 257 aaPredicted RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 TAP1Q03518 808 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 NLGN1Q8N2Q7 840 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 GDPD5Q8WTR4 605 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 PRPF18Q99633 342 aaKnown RBP14.63□□□□□ -0.07
EPHB3-201ENST00000330394 MXRA8Q9BRK3 442 aa14.63□□□□□ -0.07
EPHB3-201ENST00000330394 C2orf71A6NGG8 1288 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SLITRK3O94933 977 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SREBF1P36956 1147 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SLC25A3Q00325 362 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 RIPK1Q13546 671 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 CUL2Q13617 745 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 GADL1Q6ZQY3 521 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ACER1Q8TDN7 264 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SRPK1Q96SB4 655 aaKnown RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 KCTD10Q9H3F6 313 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SPC25Q9HBM1 224 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 STARD13Q9Y3M8 1113 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SNX13Q9Y5W8 968 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 RIC1Q4ADV7 1423 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 DGAT1O75907 488 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 BAATQ14032 418 aaPredicted RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 CLEC16AQ2KHT3 1053 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 OTOAQ7RTW8 1153 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SLC26A11Q86WA9 606 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 OR6P1Q8NGX9 317 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ART4Q93070 314 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SIKE1Q9BRV8 207 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ZNF302Q9NR11 478 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 FAM49BQ9NUQ9 324 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SUN2Q9UH99 717 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SOX13Q9UN79 622 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ORC6Q9Y5N6 252 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 DLG5Q8TDM6 1919 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 NWD1Q149M9 1564 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ASTN1O14525 1302 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 KBTBD13C9JR72 458 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 RBAK-RBAKDNI3L0D1 243 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 APBA3O96018 575 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ATICP31939 592 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ZNF229Q9UJW7 825 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 TSC22D4Q9Y3Q8 395 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SPDYE16A6NNV3 312 aaPredicted RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ANKRD63C9JTQ0 380 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 MT-CO1P00395 513 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 LCP1P13796 627 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 TFE3P19532 575 aaPredicted RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 TAC1P20366 129 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 NPTX2P47972 431 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 CDK16Q00536 496 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 USP10Q14694 798 aaKnown RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 PODNQ7Z5L7 613 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 DDIASQ8IXT1 998 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 NSUN6Q8TEA1 469 aaKnown RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 ZNF669Q96BR6 464 aaPredicted RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 GRIP2Q9C0E4 1043 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 FAM49AQ9H0Q0 323 aaPredicted RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 DENND2DQ9H6A0 471 aaPredicted RBP14.62□□□□□ -0.07
EPHB3-201ENST00000330394 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
EPHB3-201ENST00000330394 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms