RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 CCDC134Q9H6E4 229 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 RIOX1Q9H6W3 641 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 NCAM1P13591 858 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 PTGER2P43116 358 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 DNAJC3Q13217 504 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 EZH2Q15910 746 aaKnown RBP11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 SPOCD1Q6ZMY3 1216 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 MYCBPAPQ8TBZ2 947 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 SLC20A1Q8WUM9 679 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 LZICQ8WZA0 190 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 FAM162AQ96A26 154 aa11.36□□□□□ -0.59
SNRNP200-201ENST00000323853 H3BQF6 201 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 DGKIO75912 1065 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 ORC1Q13415 861 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 ZNF720Q7Z2F6 126 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 EME1Q96AY2 570 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 SPATA17Q96L03 361 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 SEPT5Q99719 369 aaPredicted RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 ZNF197O14709 1029 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 GLRA3O75311 464 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 HIST1H2AGP0C0S8 130 aaPredicted RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 VDRP11473 427 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 HIST1H2ADP20671 130 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 VHLP40337 213 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 TBX2Q13207 712 aaPredicted RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 BOLA3Q53S33 107 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 C11orf63Q6NUN7 778 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 SNX31Q8N9S9 440 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 KIAA0895Q8NCT3 520 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 GFM2Q969S9 779 aaKnown RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 HIST1H2AHQ96KK5 128 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 HIST1H2AJQ99878 128 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 CBWD1Q9BRT8 395 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 H2AFJQ9BTM1 129 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 RUBCNLQ9H714 662 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 PRDM5Q9NQX1 630 aaPredicted RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 PXMP2Q9NR77 195 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 PCDHGB4Q9UN71 923 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 FAM200BP0CF97 657 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 PCSK1P29120 753 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 CPT1AP50416 773 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 ATXN3P54252 364 aaPredicted RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 MTM1Q13496 603 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 THEMIS2Q5TEJ8 643 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 RAB42Q8N4Z0 105 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 GPRC5AQ8NFJ5 357 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 POP1Q99575 1024 aaKnown RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 LBHD1Q9BQE6 289 aaPredicted RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 SLC39A10Q9ULF5 831 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 APOA4P06727 396 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 CYP2C9P11712 490 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 ZNF669Q96BR6 464 aaPredicted RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 ZNF518BQ9C0D4 1074 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 LSM7Q9UK45 103 aaKnown RBP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 ADGRA2Q96PE1 1338 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 CES2O00748 559 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 GZMAP12544 262 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 RARGP13631 454 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 AVPR1AP37288 418 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 CYB5D1Q6P9G0 228 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 OSGEPQ9NPF4 335 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 DYRK4Q9NR20 520 aa11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNRNP200-201ENST00000323853 MAPTP10636 758 aaKnown RBP11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 SERPINB8P50452 374 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 OVGP1Q12889 678 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 WDR49Q8IV35 697 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 TNIP2Q8NFZ5 429 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 SH3GL3Q99963 347 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 OGTO15294 1046 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 MAN1A2O60476 641 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 ETFBP38117 255 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 CPA2P48052 419 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 SERPINB10P48595 397 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 COPAP53621 1224 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 KCNK10P57789 538 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 DSG1Q02413 1049 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 GTF2H3Q13889 308 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 PTK2BQ14289 1009 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 NEUROG2Q9H2A3 272 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 CD248Q9HCU0 757 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 O00370 1275 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 PYGLP06737 847 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 TCN1P20061 433 aaPredicted RBP11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 ZNF484Q5JVG2 852 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 GALNT4Q8N4A0 578 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 CDC42EP4Q9H3Q1 356 aaKnown RBP11.34□□□□□ -0.59
SNRNP200-201ENST00000323853 L1RE1Q9UN81 338 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms