RNA–Protein interactions for RNA: ENST00000323434.12

RPH3AL-201, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 1 (best) BASIC

Gene RPH3AL, Length 2,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-201ENST00000323434 PSMC4P43686 418 aa16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 RAP1GAPP47736 663 aa16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 ZNF699Q32M78 642 aa16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 IER5Q5VY09 327 aa16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 ZCCHC9Q8N567 271 aaKnown RBP16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 TMEM35BQ8NCS4 154 aa16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 COPS5Q92905 334 aa16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 PPP1R16BQ96T49 567 aa16.07■□□□□ 0.16
RPH3AL-201ENST00000323434 PEX11AO75192 247 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 CCNHP51946 323 aaPredicted RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 PLCB3Q01970 1234 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 FASTKD3Q14CZ7 662 aaKnown RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 SGSM1Q2NKQ1 1148 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 VSIG1Q86XK7 387 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 RIBC1Q8N443 379 aaPredicted RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 BBOF1Q8ND07 529 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 SLITRK1Q96PX8 696 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 POLIQ9UNA4 740 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 EXOC1LA0A1B0GW35 172 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 LRRD1A4D1F6 860 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 CALB1P05937 261 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 BLMHQ13867 455 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 PKN2Q16513 984 aaKnown RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 CDCA2Q69YH5 1023 aaPredicted RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 CAPN12Q6ZSI9 719 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 RCOR2Q8IZ40 523 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 WDTC1Q8N5D0 677 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 SLC7A6OSQ96CW6 309 aaPredicted RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 GPR20Q99678 358 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 SAYSD1Q9NPB0 183 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 ZMYND8Q9ULU4 1186 aaPredicted RBP16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 USH1CQ9Y6N9 552 aa16.06■□□□□ 0.16
RPH3AL-201ENST00000323434 POLR2AP24928 1970 aaKnown RBP16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 PRPF4O43172 522 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■■■■□ 19.8
RPH3AL-201ENST00000323434 TGFB3P10600 412 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 R3HDM1Q15032 1099 aaKnown RBP16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 FBXO16Q8IX29 292 aaPredicted RBP16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 TMEM192Q8IY95 271 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 UBR7Q8N806 425 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 FAM13CQ8NE31 585 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 SPATA33Q96N06 139 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 FAM167BQ9BTA0 163 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 TJP2Q9UDY2 1190 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 CPSF3Q9UKF6 684 aaKnown RBP16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 ZBTB42B2RXF5 422 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 LIASO43766 372 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 FGFR1P11362 822 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 CLCN3P51790 818 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 AP3M2P53677 418 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 DYNLT1P63172 113 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 IGBP1P78318 339 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 MXD4Q14582 209 aaPredicted RBP16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 SETDB1Q15047 1291 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 TAF11Q15544 211 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 SMTNL2Q2TAL5 461 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 EEF1DP3Q658K8 133 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 MOB2Q70IA6 237 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 KCNN1Q92952 543 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 RBM41Q96IZ5 413 aaKnown RBP16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 CLMNQ96JQ2 1002 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 FAM167AQ96KS9 214 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 LRRC37BQ96QE4 947 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 TRABDQ9H4I3 376 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 RNPEPL1Q9HAU8 725 aa16.05■□□□□ 0.16
RPH3AL-201ENST00000323434 POC1B-GALNT4F8VUJ3 575 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 EDF1O60869 148 aaKnown RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 TJP3O95049 919 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 IFNB1P01574 187 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 RPA3P35244 121 aaPredicted RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 ARSEP51690 589 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 CDH8P55286 799 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 GRIK3Q13003 919 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 SLC1A5Q15758 541 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 ATF7IP2Q5U623 682 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 DENND1BQ6P3S1 775 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 RGS9BPQ6ZS82 235 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 C4orf33Q8N1A6 199 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 AGGF1Q8N302 714 aaeCLIP16.04■□□□□ 0.161e-8■■■■■ 50.2
RPH3AL-201ENST00000323434 C10orf82Q8WW14 230 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 NAF1Q96HR8 494 aaKnown RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 ZWILCHQ9H900 591 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 SAE1Q9UBE0 346 aaPredicted RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 EIF4E1BA6NMX2 242 aaKnown RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 DDNO94850 711 aaPredicted RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 HOXC6P09630 235 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 CXCL8P10145 99 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 MCL1Q07820 350 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 GPS1Q13098 491 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 PDK4Q16654 411 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 CCDC142Q17RM4 750 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 KCNT1Q5JUK3 1230 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 NAIF1Q69YI7 327 aaPredicted RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 CAPRIN2Q6IMN6 1127 aaKnown RBP16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 SPOCD1Q6ZMY3 1216 aa16.04■□□□□ 0.16
RPH3AL-201ENST00000323434 GPC2Q8N158 579 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms