RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ZBTB41Q5SVQ8 909 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 CIAPIN1Q6FI81 312 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 RFWD3Q6PCD5 774 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 OR5B17Q8NGF7 314 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 SKA1Q96BD8 255 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 ZNF518BQ9C0D4 1074 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 ARL8BQ9NVJ2 186 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 DCTN4Q9UJW0 460 aa20.05■□□□□ 0.8
RTN4-201ENST00000317610 SMAPO00193 183 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 IL1BP01584 269 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 ATP4AP20648 1035 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 CDH5P33151 784 aaPredicted RBP20.04■□□□□ 0.8
RTN4-201ENST00000317610 GDF10P55107 478 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 SATB1Q01826 763 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 NCOA4Q13772 614 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 TAZQ16635 292 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 CCDC60Q8IWA6 550 aaPredicted RBP20.04■□□□□ 0.8
RTN4-201ENST00000317610 TTC13Q8NBP0 860 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 ZNF483Q8TF39 744 aaPredicted RBP20.04■□□□□ 0.8
RTN4-201ENST00000317610 PTPRN2Q92932 1015 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 ZNF333Q96JL9 665 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 DOCK5Q9H7D0 1870 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 A0A0B4J269 797 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 WDR91A4D1P6 747 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 DPPA5A6NC42 116 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 SIGLEC16A6NMB1 481 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 PLSCR1O15162 318 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 GSC2O15499 205 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 OTUD4Q01804 1114 aaKnown RBP20.04■□□□□ 0.8
RTN4-201ENST00000317610 RHPN2Q8IUC4 686 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 TMEM35BQ8NCS4 154 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 FBXO36Q8NEA4 188 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 ACTL9Q8TC94 416 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 NSL1Q96IY1 281 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 ZBTB45Q96K62 511 aaPredicted RBP20.04■□□□□ 0.8
RTN4-201ENST00000317610 KCNK13Q9HB14 408 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 HEY2Q9UBP5 337 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 MTO1Q9Y2Z2 717 aaKnown RBP20.04■□□□□ 0.8
RTN4-201ENST00000317610 TELO2Q9Y4R8 837 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 ADGRA2Q96PE1 1338 aa20.04■□□□□ 0.8
RTN4-201ENST00000317610 NR3C2P08235 984 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 RPL22P35268 128 aaKnown RBP20.03■□□□□ 0.8
RTN4-201ENST00000317610 ETV4P43268 484 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 NEK3P51956 506 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 OVGP1Q12889 678 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 KRT72Q14CN4 511 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 EMC2Q15006 297 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 DSTYKQ6XUX3 929 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 EP400NLQ6ZTU2 488 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 BBS12Q6ZW61 710 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 FAM136AQ96C01 138 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 TSSK1BQ9BXA7 367 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 FER1L6Q2WGJ9 1857 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 ASS1P00966 412 aaKnown RBP20.03■□□□□ 0.8
RTN4-201ENST00000317610 VHLP40337 213 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 ARFIP2P53365 341 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 CDK16Q00536 496 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 SLC25A11Q02978 314 aaKnown RBP20.03■□□□□ 0.8
RTN4-201ENST00000317610 FAM91A1Q658Y4 838 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 ABHD15Q6UXT9 468 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 WDTC1Q8N5D0 677 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 MSTO1Q9BUK6 570 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 MMADHCQ9H3L0 296 aaPredicted RBP20.03■□□□□ 0.8
RTN4-201ENST00000317610 NMRK1Q9NWW6 199 aa20.03■□□□□ 0.8
RTN4-201ENST00000317610 PARP14Q460N5 1801 aa20.02■□□□□ 0.8
RTN4-201ENST00000317610 NVLO15381 856 aaKnown RBP20.02■□□□□ 0.8
RTN4-201ENST00000317610 RGS20O76081 388 aa20.02■□□□□ 0.8
RTN4-201ENST00000317610 PRKD1Q15139 912 aaPredicted RBP20.02■□□□□ 0.8
RTN4-201ENST00000317610 XKR3Q5GH77 459 aa20.02■□□□□ 0.8
RTN4-201ENST00000317610 SH2D5Q6ZV89 423 aa20.02■□□□□ 0.8
RTN4-201ENST00000317610 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.02■□□□□ 0.8
RTN4-201ENST00000317610 C12orf65Q9H3J6 166 aaKnown RBP20.02■□□□□ 0.8
RTN4-201ENST00000317610 JPH1Q9HDC5 661 aaPredicted RBP20.02■□□□□ 0.8
RTN4-201ENST00000317610 TRPC5Q9UL62 973 aaPredicted RBP20.02■□□□□ 0.8
RTN4-201ENST00000317610 EP400Q96L91 3159 aa20.02■□□□□ 0.8
RTN4-201ENST00000317610 A0A0G2JND7 137 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 TMEM63AO94886 807 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 NPTXRO95502 500 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 EIF4BP23588 611 aaKnown RBP20.02■□□□□ 0.79
RTN4-201ENST00000317610 BRD2P25440 801 aaKnown RBP20.02■□□□□ 0.79
RTN4-201ENST00000317610 CHRNA5P30532 468 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 NAMPTP43490 491 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 OCRLQ01968 901 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 SLC18A2Q05940 514 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 KLC1Q07866 573 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 BAATQ14032 418 aaPredicted RBP20.02■□□□□ 0.79
RTN4-201ENST00000317610 SCARA3Q6AZY7 606 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 LRRC6Q86X45 466 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 PALM2Q8IXS6 379 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 FLAD1Q8NFF5 587 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 PCDHGC3Q9UN70 934 aa20.02■□□□□ 0.79
RTN4-201ENST00000317610 TCRBV7S3A2A0A539 114 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 CFAP69A5D8W1 941 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 GOLGA8RI6L899 631 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 DLDP09622 509 aaKnown RBP20.01■□□□□ 0.79
RTN4-201ENST00000317610 MUM1Q2TAK8 710 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 MTERF2Q49AM1 385 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 IRGCQ6NXR0 463 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 MTMR14Q8NCE2 650 aa20.01■□□□□ 0.79
RTN4-201ENST00000317610 APOPT1Q96IL0 206 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms