RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CAV1Q03135 178 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 CYP24A1Q07973 514 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 STAT4Q14765 748 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 PPM1KQ8N3J5 372 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 FAM118BQ9BPY3 351 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 SMARCAD1Q9H4L7 1026 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 DCTN3O75935 186 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 SNUPNO95149 360 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 LGALS2P05162 132 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 INSRRP14616 1297 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 RBBP5Q15291 538 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 TAF1CQ15572 869 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 EPC2Q52LR7 807 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 EFCAB12Q6NXP0 572 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 GRK7Q8WTQ7 553 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 ZNF516Q92618 1163 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 SYT15Q9BQS2 421 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 TINF2Q9BSI4 451 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 DCLK3Q9C098 648 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 R3HDM2Q9Y2K5 976 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 CEP350Q5VT06 3117 aa18.09■□□□□ 0.49
SCAMP4-201ENST00000316097 ADCY3O60266 1144 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 ALDH3A1P30838 453 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 TSNAXIP1Q2TAA8 658 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 SYDE1Q6ZW31 735 aaPredicted RBP18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 EGFL6Q8IUX8 553 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 ENDOVQ8N8Q3 282 aaKnown RBP18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 TMEM174Q8WUU8 243 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 DNAJC9Q8WXX5 260 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 MFSD14AQ96MC6 490 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 FBXL18Q96ME1 805 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 DENND2DQ9H6A0 471 aaPredicted RBP18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 EURLQ9NYK6 297 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 UVRAGQ9P2Y5 699 aa18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 AGO2Q9UKV8 859 aaKnown RBP18.08■□□□□ 0.49
SCAMP4-201ENST00000316097 GNAT1P11488 350 aa18.08■□□□□ 0.48
SCAMP4-201ENST00000316097 CCL14Q16627 93 aa18.08■□□□□ 0.48
SCAMP4-201ENST00000316097 SV2AQ7L0J3 742 aa18.08■□□□□ 0.48
SCAMP4-201ENST00000316097 MAML1Q92585 1016 aa18.08■□□□□ 0.48
SCAMP4-201ENST00000316097 VTI1AQ96AJ9 217 aa18.08■□□□□ 0.48
SCAMP4-201ENST00000316097 ANAPC7Q9UJX3 599 aa18.08■□□□□ 0.48
SCAMP4-201ENST00000316097 PTPRJQ12913 1337 aa18.08■□□□□ 0.48
SCAMP4-201ENST00000316097 CALCAP01258 141 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 MAN1A1P33908 653 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 SESN3P58005 492 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 SNRPFP62306 86 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 KLC1Q07866 573 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 LAMC2Q13753 1193 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 SPARCL1Q14515 664 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 MUM1Q2TAK8 710 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 TMEM154Q6P9G4 183 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 FAM71AQ8IYT1 594 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 FAM167AQ96KS9 214 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 KREMEN1Q96MU8 473 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 TCHPQ9BT92 498 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 EXOC1LA0A1B0GW35 172 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 MAGEB2O15479 319 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 B4GALT5O43286 388 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 PECAM1P16284 738 aaPredicted RBP18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 TNFSF9P41273 254 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 PAPOLAP51003 745 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 WASHC2DQ5SRD0 308 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 IZUMO3Q5VZ72 239 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 TRABD2AQ86V40 505 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 ABRAQ8N0Z2 381 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 ATL2Q8NHH9 583 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 TEKT4Q8WW24 435 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 MSTO1Q9BUK6 570 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 MINDY3Q9H8M7 445 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 VTA1Q9NP79 307 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 PAPOLBQ9NRJ5 636 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 ERAP1Q9NZ08 941 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 GRID1Q9ULK0 1009 aa18.07■□□□□ 0.48
SCAMP4-201ENST00000316097 PLXNB2O15031 1838 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 ACADSP16219 412 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 GARTP22102 1010 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 MAPK4P31152 587 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 RASSF2P50749 326 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 ZNF365Q70YC5 407 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 C4orf33Q8N1A6 199 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 LRRC8CQ8TDW0 803 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 POC1B-GALNT4F8VUJ3 575 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 EDF1O60869 148 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 IQCF3P0C7M6 154 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 TNNI1P19237 187 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 CYP2B6P20813 491 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 TAF1BQ53T94 588 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 IER5Q5VY09 327 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 KRT39Q6A163 491 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 RGMBQ6NW40 437 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 RNF217Q8TC41 542 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 C10orf82Q8WW14 230 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 C16orf70Q9BSU1 422 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 TRABDQ9H4I3 376 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 PIDD1Q9HB75 910 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 DOCK3Q8IZD9 2030 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 IGKV6-21A0A0C4DH24 114 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms