RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 CRTAC1Q9NQ79 661 aa8.39□□□□□ -1.07
CDC42-201ENST00000315554 DZANK1Q9NVP4 752 aa8.39□□□□□ -1.07
CDC42-201ENST00000315554 GCNT4Q9P109 453 aa8.39□□□□□ -1.07
CDC42-201ENST00000315554 AFF4Q9UHB7 1163 aaKnown RBP8.39□□□□□ -1.07
CDC42-201ENST00000315554 COG5Q9UP83 839 aa8.39□□□□□ -1.07
CDC42-201ENST00000315554 COQ4Q9Y3A0 265 aa8.39□□□□□ -1.07
CDC42-201ENST00000315554 BECN2A8MW95 431 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 CLDN5O00501 218 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 MBTPS2O43462 519 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 CALCAP01258 141 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 ATF2P15336 505 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 SLC9A1P19634 815 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 EEF1GP26641 437 aaKnown RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 PCSK1P29120 753 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 NTHL1P78549 312 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 CYP27A1Q02318 531 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 TWF1Q12792 350 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 CETN1Q12798 172 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 IQCB1Q15051 598 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 LEXMQ3ZCV2 418 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 VWA3BQ502W6 1294 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PTCRAQ6ISU1 281 aaPredicted RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 ACOT1Q86TX2 421 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDC42-201ENST00000315554 DCP1BQ8IZD4 617 aaKnown RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 PPM1KQ8N3J5 372 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 SMG7Q92540 1137 aaKnown RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 MYLPFQ96A32 169 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 ZNF707Q96C28 371 aaPredicted RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 NT5C1BQ96P26 610 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PKMYT1Q99640 499 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 ACBD6Q9BR61 282 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 BCO2Q9BYV7 579 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 ELOVL4Q9GZR5 314 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PLEKHA4Q9H4M7 779 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 SFXN1Q9H9B4 322 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 IGSF5Q9NSI5 407 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 FAM49BQ9NUQ9 324 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 HCFC1R1Q9NWW0 138 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 CDH9Q9ULB4 789 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 USP15Q9Y4E8 981 aaPredicted RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 YIPF1Q9Y548 306 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 INSL5Q9Y5Q6 135 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 EYSQ5T1H1 3165 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 FSD2A1L4K1 749 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 SMTNL1A8MU46 457 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 P4HA2O15460 535 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 LRG1P02750 347 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 CCDC130P13994 396 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 ZNF18P17022 549 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PTPN1P18031 435 aaKnown RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 CYP2F1P24903 491 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 KLK7P49862 253 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 COPB1P53618 953 aaKnown RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 SMAD4Q13485 552 aaKnown RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 CUL2Q13617 745 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 EXOC3L4Q17RC7 722 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 MGAT5BQ3V5L5 792 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 TPGS2Q68CL5 300 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PHLDB3Q6NSJ2 640 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 GBP6Q6ZN66 633 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 CCDC149Q6ZUS6 474 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 SPATA2LQ8IUW3 424 aaPredicted RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 GPIHBP1Q8IV16 184 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 SCN4BQ8IWT1 228 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 TCEAL8Q8IYN2 117 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 C12orf29Q8N999 325 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 SMRP1Q8NCR6 262 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 GIPC2Q8TF65 315 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 BPIFA3Q9BQP9 254 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 TSPY26PQ9H489 355 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PIDD1Q9HB75 910 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 UBE2TQ9NPD8 197 aaPredicted RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 CISHQ9NSE2 258 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 LIMA1Q9UHB6 759 aaKnown RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 AJAP1Q9UKB5 411 aaPredicted RBP8.38□□□□□ -1.07
CDC42-201ENST00000315554 PCDHB5Q9Y5E4 795 aa8.38□□□□□ -1.07
CDC42-201ENST00000315554 PMM2O15305 246 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 CILPO75339 1184 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 HAPLN1P10915 354 aaPredicted RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 HOXB8P17481 243 aaPredicted RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 BDNFP23560 247 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 PON1P27169 355 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 ADORA2BP29275 332 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 CACNA2D1P54289 1103 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 MRPS5P82675 430 aaKnown RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 KCNMA1Q12791 1236 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 DDR2Q16832 855 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 ARHGAP44Q17R89 818 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
CDC42-201ENST00000315554 CES5AQ6NT32 575 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 FAM171BQ6P995 826 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 TRIM65Q6PJ69 517 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 ELMSAN1Q6PJG2 1045 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 LRSAM1Q6UWE0 723 aa8.37□□□□□ -1.07
CDC42-201ENST00000315554 GRASPQ7Z6J2 395 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms