RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 EPS8L1Q8TE68 723 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 C2orf15Q8WU43 125 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 DDX1Q92499 740 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 FUBP3Q96I24 572 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 FAM161BQ96MY7 647 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 DNAJC7Q99615 494 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 CRISPLD1Q9H336 500 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 NSUN3Q9H649 340 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 TLE6Q9H808 572 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 FAM49BQ9NUQ9 324 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 HSFX1Q9UBD0 423 aa13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 NOCTQ9UK39 431 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-201ENST00000312547 TRANK1O15050 2925 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 PER2O15055 1255 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 CD19P15391 556 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 GNA15P30679 374 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 MAGEA11P43364 429 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 CNGA2Q16280 664 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 MEA1Q16626 185 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 TCEAL5Q5H9L2 206 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 PPP1R26Q5T8A7 1209 aaPredicted RBP13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 SFMBT2Q5VUG0 894 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 LCLAT1Q6UWP7 414 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 C4orf50Q6ZRC1 276 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 NOP9Q86U38 636 aaKnown RBP13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 PALB2Q86YC2 1186 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 TC2NQ8N9U0 490 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 OR8K1Q8NGG5 319 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 OLIG1Q8TAK6 271 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 SPPL2BQ8TCT7 592 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 SLC2A14Q8TDB8 520 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 ZNF606Q8WXB4 792 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 PGLYRP2Q96PD5 576 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 SYT11Q9BT88 431 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 ZNF518BQ9C0D4 1074 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 FBXW11Q9UKB1 542 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 HCFC2Q9Y5Z7 792 aa13.43□□□□□ -0.26
CHMP2A-201ENST00000312547 AKR1B15C9JRZ8 316 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 CLDN5O00501 218 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 SEC24AO95486 1093 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 GLUD1P00367 558 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 TPM1P09493 284 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 CCDC172P0C7W6 258 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 NRIP1P48552 1158 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 ADKP55263 362 aaKnown RBP13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 CYP27A1Q02318 531 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 ADCY1Q08828 1119 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 GOLGA8FQ08AF8 430 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 GOLGA8DPQ0D2H9 430 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 HYAL1Q12794 435 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 DUSP4Q13115 394 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 STILQ15468 1287 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 ASIC2Q16515 512 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 PKDCCQ504Y2 493 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 HGSNATQ68CP4 663 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 RBM23Q86U06 439 aaKnown RBP13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 FAM35AQ86V20 835 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 SPATA2LQ8IUW3 424 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 GPIHBP1Q8IV16 184 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 CNGA4Q8IV77 575 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 TCEAL8Q8IYN2 117 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 TTC9BQ8N6N2 239 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 VN1R2Q8NFZ6 395 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 CDX2Q99626 313 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 CSNK1G1Q9HCP0 422 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 ABHD10Q9NUJ1 306 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 TMEM30AQ9NV96 361 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 ABI2Q9NYB9 513 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 TSPAN16Q9UKR8 245 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 PCDHGC3Q9UN70 934 aa13.42□□□□□ -0.26
CHMP2A-201ENST00000312547 THAP12O43422 761 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 MED7O43513 233 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 MICAL2O94851 1124 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 PAPLNO95428 1278 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 HAPLN1P10915 354 aaPredicted RBP13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 EPCAMP16422 314 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 CHRNB2P17787 502 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 BDNFP23560 247 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 CYP2F1P24903 491 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 ADORA2BP29275 332 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 PDE6CP51160 858 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 CDR1P51861 262 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 CACNA2D1P54289 1103 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 CDR2Q01850 454 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 ARID5AQ03989 594 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 COL19A1Q14993 1142 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 GOLGA7BQ2TAP0 167 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 WDR59Q6PJI9 974 aa13.41□□□□□ -0.26
CHMP2A-201ENST00000312547 VSTM1Q6UX27 236 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms