RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 IFNGR2P38484 337 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 NUDT2P50583 147 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 C10orf53Q8N6V4 93 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 IL17REQ8NFR9 667 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 KLHL25Q9H0H3 589 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 KLHL24Q6TFL4 600 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 CDH24Q86UP0 819 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 GSPT2Q8IYD1 628 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 MAGEB18Q96M61 343 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 DLGAP2Q9P1A6 1054 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 RNF17Q9BXT8 1623 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 O00370 1275 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 XPO1O14980 1071 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 GARTP22102 1010 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 MAPKAPK2P49137 400 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.06■□□□□ 0.167e-6■■■■■ 33.2
HCFC1-201ENST00000310441 THUMPD3Q9BV44 507 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 TRIM49BA6NDI0 452 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 TADA2AO75478 443 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 S100A9P06702 114 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 TRMT5Q32P41 509 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 SLITRK1Q96PX8 696 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 VTA1Q9NP79 307 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 VAV3Q9UKW4 847 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 PTPRKQ15262 1439 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 FMO5P49326 533 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 RCN1Q15293 331 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 NDUFAF6Q330K2 333 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 FAM220BPB1ANY3 271 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 B2RBV5 119 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 STAT5AP42229 794 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 STAT5BP51692 787 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 STX4Q12846 297 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 NCOA4Q13772 614 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 ANKMY2Q8IV38 441 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 SH3BP4Q9P0V3 963 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 PIPSLA2A3N6 862 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 MEI4A8MW99 385 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 SNPHO15079 494 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 PEX1O43933 1283 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 AKAP5P24588 427 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ALX1Q15699 326 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 RNFT2Q96EX2 444 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CYP39A1Q9NYL5 469 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 KRT34O76011 436 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 RFC5P40937 340 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 NAB2Q15742 525 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ARHGAP15Q53QZ3 475 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 TIGD7Q6NT04 549 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF746Q6NUN9 644 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ZFP1Q6P2D0 407 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 OR8H2Q8N162 312 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CENPTQ96BT3 561 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CATSPER2Q96P56 530 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 TSR3Q9UJK0 312 aaKnown RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 RNF112Q9ULX5 631 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 KIF28PB7ZC32 967 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 WDR36Q8NI36 951 aaKnown RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 SEPT1Q8WYJ6 367 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 PABPC5Q96DU9 382 aaKnown RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 SLITRK2Q9H156 845 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 WHRNQ9P202 907 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 TMEM2Q9UHN6 1383 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 NRKQ7Z2Y5 1582 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 AP3M1Q9Y2T2 418 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 PCDHB2Q9Y5E7 798 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 AFDNP55196 1824 aaKnown RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 WWP2O00308 870 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CSPG5O95196 566 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 GYS2P54840 703 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 WDR72Q3MJ13 1102 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 IL31Q6EBC2 164 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 HAUS6Q7Z4H7 955 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CROCCP3Q8IVE0 287 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 LPAR1Q92633 364 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 OSBP2Q969R2 916 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 SPATA2Q9UM82 520 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 UGGT1Q9NYU2 1555 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 PRRG1O14668 218 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CINPQ9BW66 212 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ENO4A6NNW6 628 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 CLPTM1O96005 669 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF23P17027 643 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 PDCD10Q9BUL8 212 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 COMMD8Q9NX08 183 aa16.05■□□□□ 0.16
HCFC1-201ENST00000310441 MARCOQ9UEW3 520 aaPredicted RBP16.05■□□□□ 0.16
HCFC1-201ENST00000310441 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 TGM2P21980 687 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 MAD2L1Q13257 205 aaPredicted RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 PLA2G4FQ68DD2 849 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms