RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SHOC2Q9UQ13 582 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 ATXN2Q99700 1313 aaKnown RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 MMP10P09238 476 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 KCNK10P57789 538 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 CUL2Q13617 745 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 MEA1Q16626 185 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 KLF6Q99612 283 aaPredicted RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 MXRA8Q9BRK3 442 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 ZNF518BQ9C0D4 1074 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 NEUROG2Q9H2A3 272 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 ZSCAN9O15535 394 aaPredicted RBP13.68□□□□□ -0.22
SNED1-201ENST00000310397 GAS2O43903 313 aaKnown RBP13.68□□□□□ -0.22
SNED1-201ENST00000310397 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 SPDYAQ5MJ70 313 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 AGAP9Q5VTM2 703 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 CREG2Q8IUH2 290 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
SNED1-201ENST00000310397 MFN1Q8IWA4 741 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 WNK4Q96J92 1243 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 PRR12Q9ULL5 1215 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 RIPK2O43353 540 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 NDUFS3O75489 264 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 ARPP19P56211 112 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 TTC23LQ6PF05 361 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 AFG1LQ8WV93 481 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 RMDN1Q96DB5 314 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.68□□□□□ -0.22
SNED1-201ENST00000310397 TJP2Q9UDY2 1190 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 MROH2AA6NES4 1674 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 SERPINB8P50452 374 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 TRIM60Q495X7 471 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 SYCP2LQ5T4T6 812 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 DEPDC1Q5TB30 811 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 PPP2R3CQ969Q6 453 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 PGM2Q96G03 612 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 CATSPER2Q96P56 530 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 WRNIP1Q96S55 665 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 ZBTB39O15060 712 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 PMS1P54277 932 aaKnown RBP13.68□□□□□ -0.22
SNED1-201ENST00000310397 SEL1L3Q68CR1 1132 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 ZFP1Q6P2D0 407 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 HOMEZQ8IX15 550 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 ABCF3Q9NUQ8 709 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 NUMA1Q14980 2115 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 CD4P01730 458 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 PDK2Q15119 407 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 FUKQ8N0W3 1084 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 OPTNQ96CV9 577 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 RBBP8Q99708 897 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 VPS9D1Q9Y2B5 631 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 CCDC78A2IDD5 438 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 CCDC15Q0P6D6 951 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 OVGP1Q12889 678 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 IFNEQ86WN2 208 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 TRIM69Q86WT6 500 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 TLR10Q9BXR5 811 aa13.68□□□□□ -0.22
SNED1-201ENST00000310397 PTGER2P43116 358 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 EFHC1Q5JVL4 640 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 BNC2Q6ZN30 1099 aaPredicted RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 LRRC74BQ6ZQY2 392 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 ZNF571Q7Z3V5 609 aaPredicted RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 APPL2Q8NEU8 664 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 DDX50Q9BQ39 737 aaKnown RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 CASS4Q9NQ75 786 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 MYOM1P52179 1685 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 SDR42E2A6NKP2 422 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 MAGEB2O15479 319 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 FCGR1AP12314 374 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 SPP2Q13103 211 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 COBLL1Q53SF7 1204 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 TGM2P21980 687 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 PPP4CP60510 307 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 GJB7Q6PEY0 223 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 CD302Q8IX05 232 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 FAM118BQ9BPY3 351 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 EEF2KO00418 725 aaKnown RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 SLC37A4O43826 429 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 USP1O94782 785 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 SLC34A1Q06495 639 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 EZH2Q15910 746 aaKnown RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 ASIC4Q96FT7 647 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 CATSPERBQ9H7T0 1116 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 RHBDL2Q9NX52 303 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 ATP6V1E1P36543 226 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 SMAD1Q15797 465 aaKnown RBP13.67□□□□□ -0.22
SNED1-201ENST00000310397 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 HORMAD1Q86X24 394 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 ZNF786Q8N393 782 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 URGCPQ8TCY9 931 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 ZNF446Q9NWS9 450 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 NAALADL1Q9UQQ1 740 aa13.67□□□□□ -0.22
SNED1-201ENST00000310397 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms