RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 PDE8BO95263 885 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 ALDH5A1P51649 535 aaPredicted RBP8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 PEX3P56589 373 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 C21orf59P57076 290 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 PLIN5Q00G26 463 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 RESTQ13127 1097 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 DMC1Q14565 340 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 MRPL4Q9BYD3 311 aaKnown RBP8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 HPS4Q9NQG7 708 aa8.65□□□□□ -1.02
PPARGC1B-201ENST00000309241 RNASEH1O60930 286 aaKnown RBP8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 UBOX5O94941 541 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 EPB42P16452 691 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 NAB1Q13506 487 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 BBS7Q8IWZ6 715 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 DRAXINQ8NBI3 349 aaPredicted RBP8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 LRRC39Q96DD0 335 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 TRABDQ9H4I3 376 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 HACL1Q9UJ83 578 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 PALLDQ8WX93 1383 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 SEMA3DO95025 777 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 HSD17B4P51659 736 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 RPS6P62753 249 aaKnown RBP8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 DEPDC1Q5TB30 811 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 SEPT1Q8WYJ6 367 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 INPP5DQ92835 1189 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 CNOT7Q9UIV1 285 aaKnown RBP8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 TELO2Q9Y4R8 837 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 PCDHGA3Q9Y5H0 932 aa8.65□□□□□ -1.03
PPARGC1B-201ENST00000309241 ALDH1A3P47895 512 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 MYBPC2Q14324 1141 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 SPDYAQ5MJ70 313 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 FKBP9P1Q75LS8 142 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 SNIP1Q8TAD8 396 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 AGAP11Q8TF27 550 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 PIN4Q9Y237 131 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 FAM32AQ9Y421 112 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 C15orf38-AP3S2A0A0A6YYH1 394 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ANGPT2O15123 496 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 DYRK3O43781 588 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 FGAP02671 866 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 MUTP22033 750 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 TWF1Q12792 350 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 LRRC41Q15345 812 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ARPINQ7Z6K5 226 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 HDAC7Q8WUI4 952 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 MKNK1Q9BUB5 465 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ZNF556Q9HAH1 456 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 DNAAF2Q9NVR5 837 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 A0A1B0GTH6 734 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 TMEM120BA0PK00 339 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 MFN2O95140 757 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CTSHP09668 335 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 PTDSS1P48651 473 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 C11orf96Q7Z7L8 435 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 KRT78Q8N1N4 520 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 FAM20AQ96MK3 541 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 DEPDC7Q96QD5 511 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CAPN10Q9HC96 672 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 RABL2BQ9UNT1 228 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 GRAPQ13588 217 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 MAPK11Q15759 364 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 FASTKD1Q53R41 847 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 LRRC34Q8IZ02 419 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 GRAPLQ8TC17 118 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CAVIN3Q969G5 261 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 DTNAQ9Y4J8 743 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CDH3P22223 829 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CACNB3P54284 484 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 DDR1Q08345 913 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 TUBA3EQ6PEY2 450 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 LVRNQ6Q4G3 990 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 TMEM35BQ8NCS4 154 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 DYNLL2Q96FJ2 89 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ISCUQ9H1K1 167 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 LATS2Q9NRM7 1088 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ADAM22Q9P0K1 906 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 HBS1LQ9Y450 684 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ACTL7BQ9Y614 415 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ATP10BO94823 1461 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 LRG1P02750 347 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 LCP1P13796 627 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CRKP46108 304 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 RBM20Q5T481 1227 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 MINDY2Q8NBR6 621 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 PNMA6EA0A0J9YXQ4 647 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 TRIM43BA6NCK2 446 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CYP2E1P05181 493 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 BRAFP15056 766 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 CCT8P50990 548 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 ALX1Q15699 326 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 SYNE4Q8N205 404 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 SETD9Q8NE22 299 aa8.64□□□□□ -1.03
PPARGC1B-201ENST00000309241 PACSIN1Q9BY11 444 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms