RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 CDKN2BP42772 138 aa21.22■□□□□ 0.99
SSH3-202ENST00000308298 ZNF157P51786 506 aaPredicted RBP21.22■□□□□ 0.99
SSH3-202ENST00000308298 ITGA8P53708 1063 aa21.22■□□□□ 0.99
SSH3-202ENST00000308298 IRX5P78411 483 aaPredicted RBP21.22■□□□□ 0.99
SSH3-202ENST00000308298 SLC25A11Q02978 314 aaKnown RBP21.22■□□□□ 0.99
SSH3-202ENST00000308298 HIC1Q14526 733 aa21.22■□□□□ 0.99
SSH3-202ENST00000308298 HADHQ16836 314 aaKnown RBP21.22■□□□□ 0.99
SSH3-202ENST00000308298 DRICH1Q6PGQ1 229 aaPredicted RBP21.22■□□□□ 0.99
SSH3-202ENST00000308298 LCLAT1Q6UWP7 414 aa21.22■□□□□ 0.99
SSH3-202ENST00000308298 DPH6Q7L8W6 267 aa21.22■□□□□ 0.99
SSH3-202ENST00000308298 CCDC25Q86WR0 208 aa21.22■□□□□ 0.99
SSH3-202ENST00000308298 IPO4Q8TEX9 1081 aaKnown RBP21.22■□□□□ 0.99
SSH3-202ENST00000308298 ACSF2Q96CM8 615 aaPredicted RBP21.22■□□□□ 0.99
SSH3-202ENST00000308298 TSPYL1Q9H0U9 437 aa21.22■□□□□ 0.99
SSH3-202ENST00000308298 ITGBL1O95965 494 aaPredicted RBP21.21■□□□□ 0.99
SSH3-202ENST00000308298 KRT7P08729 469 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 AXLP30530 894 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 ZBTB6Q15916 424 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 TRMT10CQ7L0Y3 403 aaKnown RBP21.21■□□□□ 0.99
SSH3-202ENST00000308298 EMC1Q8N766 993 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 BBOF1Q8ND07 529 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 BEST2Q8NFU1 509 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 UBA3Q8TBC4 463 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 DNAJB3Q8WWF6 145 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 TRIM6Q9C030 488 aaPredicted RBP21.21■□□□□ 0.99
SSH3-202ENST00000308298 AAASQ9NRG9 546 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 TUBGCP4Q9UGJ1 667 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 HES2Q9Y543 173 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 CYP3A5P20815 502 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 VPS41P49754 854 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 STILQ15468 1287 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 GSTA5Q7RTV2 222 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 CROCCP2Q86T23 111 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 ARFGAP1Q8N6T3 406 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 AP5M1Q9H0R1 490 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 CNTN3Q9P232 1028 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 ANAPC5Q9UJX4 755 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 TSPAN16Q9UKR8 245 aa21.21■□□□□ 0.99
SSH3-202ENST00000308298 PPEF2O14830 753 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 MYL3P08590 195 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 CYP2B6P20813 491 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 MDH1P40925 334 aaKnown RBP21.2■□□□□ 0.98
SSH3-202ENST00000308298 GUCY1A3Q02108 690 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 BYSLQ13895 437 aaKnown RBP21.2■□□□□ 0.98
SSH3-202ENST00000308298 UBAP2Q5T6F2 1119 aaKnown RBP21.2■□□□□ 0.98
SSH3-202ENST00000308298 C17orf99Q6UX52 265 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 LRRC52Q8N7C0 313 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 TLCD1Q96CP7 247 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 NXF3Q9H4D5 531 aaKnown RBP21.2■□□□□ 0.98
SSH3-202ENST00000308298 ZWILCHQ9H900 591 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 DNPEPQ9ULA0 475 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 Q9Y3F1 56 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 SNX9Q9Y5X1 595 aa21.2■□□□□ 0.98
SSH3-202ENST00000308298 C3orf70A6NLC5 250 aaPredicted RBP21.19■□□□□ 0.98
SSH3-202ENST00000308298 CAND2O75155 1236 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 RECQL4O94761 1208 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 KLRC2P26717 231 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 CHKAP35790 457 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 RGS2P41220 211 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 ACAP1Q15027 740 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 SNX17Q15036 470 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 SKIDA1Q1XH10 827 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 FAM102AQ5T9C2 384 aaPredicted RBP21.19■□□□□ 0.98
SSH3-202ENST00000308298 ALKAL1Q6UXT8 129 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 PGM2Q96G03 612 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 TMEM109Q9BVC6 243 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 MIS12Q9H081 205 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 CDC42EP4Q9H3Q1 356 aaKnown RBP21.19■□□□□ 0.98
SSH3-202ENST00000308298 TREHO43280 583 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 IL1R2P27930 398 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 MAGOHP61326 146 aaKnown RBP21.19■□□□□ 0.98
SSH3-202ENST00000308298 PPP2R2AP63151 447 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 FOXR1Q6PIV2 292 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 CCHCR1Q8TD31 782 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 TMEM40Q8WWA1 233 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 C18orf25Q96B23 403 aaPredicted RBP21.19■□□□□ 0.98
SSH3-202ENST00000308298 MRPL45Q9BRJ2 306 aaKnown RBP21.19■□□□□ 0.98
SSH3-202ENST00000308298 KATNAL1Q9BW62 490 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 PIN4Q9Y237 131 aaKnown RBP21.19■□□□□ 0.98
SSH3-202ENST00000308298 EFR3BQ9Y2G0 817 aa21.19■□□□□ 0.98
SSH3-202ENST00000308298 LSP1P33241 339 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 BEX3Q00994 111 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 SMTNL2Q2TAL5 461 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 GOLGA7BQ2TAP0 167 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 GLRA4Q5JXX5 417 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 IZUMO3Q5VZ72 239 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 BCAS4Q8TDM0 211 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 APBA2Q99767 749 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 SLC12A6Q9UHW9 1150 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 UBQLN1Q9UMX0 589 aaKnown RBP21.18■□□□□ 0.98
SSH3-202ENST00000308298 ZNF148Q9UQR1 794 aa21.18■□□□□ 0.98
SSH3-202ENST00000308298 DRG1Q9Y295 367 aaKnown RBP21.18■□□□□ 0.98
SSH3-202ENST00000308298 DCDC2CA8MYV0 355 aa21.17■□□□□ 0.98
SSH3-202ENST00000308298 RNF8O76064 485 aa21.17■□□□□ 0.98
SSH3-202ENST00000308298 PFKMP08237 780 aa21.17■□□□□ 0.98
SSH3-202ENST00000308298 ALLCQ8N6M5 410 aa21.17■□□□□ 0.98
SSH3-202ENST00000308298 C12orf29Q8N999 325 aa21.17■□□□□ 0.98
SSH3-202ENST00000308298 SOCS4Q8WXH5 440 aa21.17■□□□□ 0.98
SSH3-202ENST00000308298 APOL6Q9BWW8 343 aa21.17■□□□□ 0.98
SSH3-202ENST00000308298 VCPP55072 806 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms