RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 TMEM79Q9BSE2 394 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 SENP6Q9GZR1 1112 aaPredicted RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 HEG1Q9ULI3 1381 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 A0A0U1RQJ8 604 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 DNALI1O14645 258 aaPredicted RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 ZMPSTE24O75844 475 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 POU4F1Q01851 419 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 LAMB3Q13751 1172 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 CYLC2Q14093 348 aaPredicted RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 LDHDQ86WU2 507 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 FIG4Q92562 907 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 ZNF512Q96ME7 567 aaPredicted RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 ARMC7Q9H6L4 198 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 PTGES3LE9PB15 166 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 HIST1H2AGP0C0S8 130 aaPredicted RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 HIST1H2ADP20671 130 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 NRF1Q16656 503 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 FBXO36Q8NEA4 188 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 GPRASP2Q96D09 838 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 HIST1H2AHQ96KK5 128 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 HIST1H2AJQ99878 128 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 H2AFJQ9BTM1 129 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 FBXO40Q9UH90 709 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 ITIH6Q6UXX5 1313 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 RNASE12Q5GAN4 147 aaKnown RBP13.13□□□□□ -0.31
USP38-201ENST00000307017 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 DNAJC16Q9Y2G8 782 aa13.13□□□□□ -0.31
USP38-201ENST00000307017 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 PRRG1O14668 218 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 PSMB9P28065 219 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 ARL4DP49703 201 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 CYP4F2P78329 520 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 ATP2C1P98194 919 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 CYP4F3Q08477 520 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 DNAJC14Q6Y2X3 702 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 YAF2Q8IY57 180 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 JPH1Q9HDC5 661 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 KIF1BO60333 1816 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 UTP15Q8TED0 518 aaKnown RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 IMPAD1Q9NX62 359 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 RBMX2Q9Y388 322 aaKnown RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 ERCC2P18074 760 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 CCND1P24385 295 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 AQP5P55064 265 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 ACSS2Q9NR19 701 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 KRT84Q9NSB2 600 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 ERI2A8K979 691 aaKnown RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 EFCAB14O75071 495 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 DSG3P32926 999 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 COILP38432 576 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 NPEPPSP55786 919 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 IL5RAQ01344 420 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 SHROOM1Q2M3G4 852 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 C11orf88Q6PI97 169 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 PTAR1Q7Z6K3 402 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 STMN3Q9NZ72 180 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 WWOXQ9NZC7 414 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 VHLP40337 213 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 CCNIQ14094 377 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 MAPRE2Q15555 327 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 ALKBH2Q6NS38 261 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 C16orf46Q6P387 395 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 OTUB1Q96FW1 271 aaPredicted RBP13.12□□□□□ -0.31
USP38-201ENST00000307017 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 SYNMO15061 1565 aa13.12□□□□□ -0.31
USP38-201ENST00000307017 AP1G2O75843 785 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 NELFEP18615 380 aaKnown RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 COPAP53621 1224 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 DEPDC7Q96QD5 511 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 KIF2CQ99661 725 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 UBOX5O94941 541 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 HSD17B4P51659 736 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 KRT77Q7Z794 578 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 MOXD2PA6NHM9 499 aa13.11□□□□□ -0.31
USP38-201ENST00000307017 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
USP38-201ENST00000307017 VTNP04004 478 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms