RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PPP2R3CQ969Q6 453 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 ZNF669Q96BR6 464 aaPredicted RBP16.6■□□□□ 0.25
USP42-201ENST00000306177 FOPNLQ96NB1 174 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 PCDHB7Q9Y5E2 793 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 GPR182O15218 404 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 PRPF4O43172 522 aaKnown RBP eCLIP16.6■□□□□ 0.25
USP42-201ENST00000306177 KLHL2O95198 593 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 SLC2A3P11169 496 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 ICE2Q659A1 982 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 WDR49Q8IV35 697 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 LATS2Q9NRM7 1088 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 A0A0A6YYK5 440 aaPredicted RBP16.6■□□□□ 0.25
USP42-201ENST00000306177 INPP5AQ14642 412 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 PRUNE1Q86TP1 453 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 DNERQ8NFT8 737 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 PACSIN1Q9BY11 444 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 MRPL1Q9BYD6 325 aaKnown RBP16.6■□□□□ 0.25
USP42-201ENST00000306177 DDIT4Q9NX09 232 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 DUSP10Q9Y6W6 482 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 ANXA9O76027 345 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 STAG3L1P0CL83 205 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 MAPTP10636 758 aaKnown RBP16.6■□□□□ 0.25
USP42-201ENST00000306177 TWF1Q12792 350 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 MTM1Q13496 603 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 AMHR2Q16671 573 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
USP42-201ENST00000306177 SHCBP1Q8NEM2 672 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 ERP27Q96DN0 273 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 WDCPQ9H6R7 721 aa16.6■□□□□ 0.25
USP42-201ENST00000306177 ASMTLO95671 621 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 ARHGEF7Q14155 803 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 PDK2Q15119 407 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 EPHX2P34913 555 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 THPOP40225 353 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 HERVK_113P62684 666 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 WDR93Q6P2C0 686 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 TRPM8Q7Z2W7 1104 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 ATP6V0D2Q8N8Y2 350 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 TAS1R2Q8TE23 839 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 PRG3Q9Y2Y8 225 aaPredicted RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 WNT10BO00744 389 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 AP1G2O75843 785 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 ALDH1A3P47895 512 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 TFDP3Q5H9I0 405 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 TDRD10Q5VZ19 366 aaKnown RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 METTL7BQ6UX53 244 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 SRLQ86TD4 932 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 ACOT1Q86TX2 421 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 RUBCNLQ9H714 662 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 MANSC1Q9H8J5 431 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 ABI2Q9NYB9 513 aaPredicted RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 AURKCQ9UQB9 309 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 RGS4P49798 205 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 OCA2Q04671 838 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 PGM5Q15124 567 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 ACTRT1Q8TDG2 376 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 E2F7Q96AV8 911 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 CYFIP2Q96F07 1278 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 KCNK16Q96T55 309 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 POP1Q99575 1024 aaKnown RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 CCDC90BQ9GZT6 254 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.59■□□□□ 0.25
USP42-201ENST00000306177 CDYLQ9Y232 598 aa16.59■□□□□ 0.25
USP42-201ENST00000306177 SUPT3HO75486 399 aa16.58■□□□□ 0.25
USP42-201ENST00000306177 ORC1Q13415 861 aa16.58■□□□□ 0.25
USP42-201ENST00000306177 KIZQ2M2Z5 673 aa16.58■□□□□ 0.25
USP42-201ENST00000306177 LONP2Q86WA8 852 aa16.58■□□□□ 0.25
USP42-201ENST00000306177 NAF1Q96HR8 494 aaKnown RBP16.58■□□□□ 0.25
USP42-201ENST00000306177 SPATA17Q96L03 361 aa16.58■□□□□ 0.25
USP42-201ENST00000306177 PSD3Q9NYI0 1048 aa16.58■□□□□ 0.25
USP42-201ENST00000306177 SCHIP1Q9P0W5 487 aaPredicted RBP16.58■□□□□ 0.25
USP42-201ENST00000306177 LSM8O95777 96 aaKnown RBP16.58■□□□□ 0.24
USP42-201ENST00000306177 IRAK1P51617 712 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 ZNF571Q7Z3V5 609 aaPredicted RBP16.58■□□□□ 0.24
USP42-201ENST00000306177 ATP8B4Q8TF62 1192 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 CDY2AQ9Y6F7 541 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 CDY1Q9Y6F8 540 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
USP42-201ENST00000306177 PSMC6P62333 389 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 C16orf89Q6UX73 402 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 PNKPQ96T60 521 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 FAM167BQ9BTA0 163 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 OSBPL1AQ9BXW6 950 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 CHCHD3Q9NX63 227 aaKnown RBP16.58■□□□□ 0.24
USP42-201ENST00000306177 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 ETFBP38117 255 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 SPDYAQ5MJ70 313 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 MROH9Q5TGP6 573 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 CYP2W1Q8TAV3 490 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 COLEC11Q9BWP8 271 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 TEKT2Q9UIF3 430 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 PKP3Q9Y446 797 aa16.58■□□□□ 0.24
USP42-201ENST00000306177 WTIPA6NIX2 430 aaPredicted RBP16.57■□□□□ 0.24
USP42-201ENST00000306177 SUPT3HB4E1H0 165 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms