RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 C18orf8Q96DM3 657 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 ADPGKQ9BRR6 497 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 DENND2DQ9H6A0 471 aaPredicted RBP11.45□□□□□ -0.58
LSM3-201ENST00000306024 VPS37BQ9H9H4 285 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 NAGPAQ9UK23 515 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 CES2O00748 559 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 ZWINTO95229 277 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 GAS8O95995 478 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 HSPA6P17066 643 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 CCNFP41002 786 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 OSTNP61366 133 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 TMEM62Q0P6H9 643 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 KYNUQ16719 465 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 TAF1BQ53T94 588 aaPredicted RBP11.45□□□□□ -0.58
LSM3-201ENST00000306024 IER5Q5VY09 327 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 XXYLT1Q8NBI6 393 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 MAGEB18Q96M61 343 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 ZNF184Q99676 751 aaPredicted RBP11.45□□□□□ -0.58
LSM3-201ENST00000306024 OLFML3Q9NRN5 406 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.45□□□□□ -0.58
LSM3-201ENST00000306024 RIPK2O43353 540 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 TPD52L2O43399 206 aaKnown RBP11.45□□□□□ -0.58
LSM3-201ENST00000306024 PTPN4P29074 926 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 PGM1P36871 562 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 PHKA2P46019 1235 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 KCNJ1P48048 391 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 CASP5P51878 434 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
LSM3-201ENST00000306024 CENPPQ6IPU0 288 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 RSPH3Q86UC2 560 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 SYN2Q92777 582 aaPredicted RBP11.45□□□□□ -0.58
LSM3-201ENST00000306024 IMPG2Q9BZV3 1241 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
LSM3-201ENST00000306024 SYNGAP1Q96PV0 1343 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 FKTNO75072 461 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 COQ9O75208 318 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 PGK1P00558 417 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 AFPP02771 609 aaKnown RBP11.44□□□□□ -0.58
LSM3-201ENST00000306024 ATF2P15336 505 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 SMPD1P17405 629 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 PTENP60484 403 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 RNF43Q68DV7 783 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
LSM3-201ENST00000306024 INPP5DQ92835 1189 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 MSTO1Q9BUK6 570 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 KATNAL1Q9BW62 490 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 LRMDAQ9H2I8 198 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 C17orf75Q9HAS0 396 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 SETD4Q9NVD3 440 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 AIPL1Q9NZN9 384 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 TELO2Q9Y4R8 837 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 EXOC1LA0A1B0GW35 172 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 EIF3DO15371 548 aaKnown RBP eCLIP11.44□□□□□ -0.58
LSM3-201ENST00000306024 CLDN3O15551 220 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 SNAI1O95863 264 aaPredicted RBP11.44□□□□□ -0.58
LSM3-201ENST00000306024 RARGP13631 454 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 ECHS1P30084 290 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 VEGFBP49765 207 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 GALCP54803 685 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 MED21Q13503 144 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 CYLC2Q14093 348 aaPredicted RBP11.44□□□□□ -0.58
LSM3-201ENST00000306024 CATSPER4Q7RTX7 472 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 THNSL1Q8IYQ7 743 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 SIKE1Q9BRV8 207 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 TUBB6Q9BUF5 446 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 SYNCQ9H7C4 482 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 LRRC4CQ9HCJ2 640 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 CTNNAL1Q9UBT7 734 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 COMMD3-BMI1R4GMX3 469 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 IGSF9BQ9UPX0 1349 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 FAM47DPA6NHR8 397 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 CYP2C9P11712 490 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
LSM3-201ENST00000306024 GJC1P36383 396 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 TM4SF4P48230 202 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 KCNA1Q09470 495 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 MYBPC3Q14896 1274 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 MTFR1Q15390 333 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 FSCN1Q16658 493 aaKnown RBP11.44□□□□□ -0.58
LSM3-201ENST00000306024 CNPY1Q3B7I2 92 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 ZNF484Q5JVG2 852 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 DAB2IPQ5VWQ8 1189 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 HGSNATQ68CP4 663 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 WDR60Q8WVS4 1066 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 SERPINB12Q96P63 405 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 C2orf40Q9H1Z8 148 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 DDX18Q9NVP1 670 aaKnown RBP11.44□□□□□ -0.58
LSM3-201ENST00000306024 ANAPC5Q9UJX4 755 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 BLOC1S6Q9UL45 172 aa11.44□□□□□ -0.58
LSM3-201ENST00000306024 ZSCAN9O15535 394 aaPredicted RBP11.43□□□□□ -0.58
LSM3-201ENST00000306024 CREB1P16220 341 aa11.43□□□□□ -0.58
LSM3-201ENST00000306024 ZFXP17010 805 aaPredicted RBP11.43□□□□□ -0.58
LSM3-201ENST00000306024 NFX1Q12986 1120 aaKnown RBP11.43□□□□□ -0.58
LSM3-201ENST00000306024 EDRF1Q3B7T1 1238 aa11.43□□□□□ -0.58
LSM3-201ENST00000306024 TRMT10CQ7L0Y3 403 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms