RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SAMD15Q9P1V8 674 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TTLL3Q9Y4R7 772 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 MCM3APO60318 1980 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 GOLGA6L10A0A0M3HER8 536 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 FAM170AA1A519 330 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 C2orf71A6NGG8 1288 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 F8W8V4 182 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 GPR25O00155 361 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ADRA1DP25100 572 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 IL1R2P27930 398 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 GABRB3P28472 473 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 HOXA13P31271 388 aaPredicted RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 NPTX2P47972 431 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 MRPS35P82673 323 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 APOFQ13790 326 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 CCNIQ14094 377 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 MESDQ14696 234 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 KPNB1Q14974 876 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 CNPY1Q3B7I2 92 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 POLNQ7Z5Q5 900 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 PNMA8AQ86V59 439 aaPredicted RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 PDSS2Q86YH6 399 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 CCDC125Q86Z20 511 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 IFNLR1Q8IU57 520 aaPredicted RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 CCNJLQ8IV13 435 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SCYL3Q8IZE3 742 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 FNIP1Q8TF40 1166 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 OXNAD1Q96HP4 312 aaPredicted RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 PLCD4Q9BRC7 762 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ZNF518BQ9C0D4 1074 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 CENPHQ9H3R5 247 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ACSS3Q9H6R3 686 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 DCLRE1BQ9H816 532 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 DBNDD1Q9H9R9 158 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SLC24A2Q9UI40 661 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 RASAL2Q9UJF2 1139 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 PPP2R3BQ9Y5P8 575 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SDR42E2A6NKP2 422 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 PENKP01210 267 aaPredicted RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 PABPC4LP0CB38 370 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 GNAT1P11488 350 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 TNFAIP3P21580 790 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 STIP1P31948 543 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 GABRB2P47870 512 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 GCLMP48507 274 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ACTR3P61158 418 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SNAPC2Q13487 334 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SNRNP35Q16560 246 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 AOC3Q16853 763 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 TMCO4Q5TGY1 634 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 NLRP9Q7RTR0 991 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 MTDHQ86UE4 582 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 SESTD1Q86VW0 696 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 BBOF1Q8ND07 529 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 FBXL13Q8NEE6 735 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 RIN3Q8TB24 985 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SCG3Q8WXD2 468 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 SAAL1Q96ER3 474 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 BICD1Q96G01 975 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 RSRC1Q96IZ7 334 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 C9orf72Q96LT7 481 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 FAM167BQ9BTA0 163 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 STMN4Q9H169 189 aaPredicted RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 VPS11Q9H270 941 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 PTPRHQ9HD43 1115 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 FBXO6Q9NRD1 293 aaPredicted RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 RAB20Q9NX57 234 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 PCDHB2Q9Y5E7 798 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ARHGEF35A5YM69 484 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 TRIM64CA6NLI5 447 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ENO4A6NNW6 628 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 MPHOSPH10O00566 681 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 ADCY6O43306 1168 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ZNF862O60290 1169 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 LGR5O75473 907 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 DGAT1O75907 488 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 GDF11O95390 407 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 IL4RP24394 825 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 HSPA1LP34931 641 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 EPS15P42566 896 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 RPL34P49207 117 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 BPIFB4P59827 614 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 RPL7AP62424 266 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 CETN1Q12798 172 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 TDRD10Q5VZ19 366 aaKnown RBP5.73□□□□□ -1.49
VPS50-202ENST00000305866 TPH2Q8IWU9 490 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 TMEM151AQ8N4L1 468 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 MCPH1Q8NEM0 835 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 DNERQ8NFT8 737 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SLC16A10Q8TF71 515 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 AFG1LQ8WV93 481 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 FAM118BQ9BPY3 351 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SPATA16Q9BXB7 569 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 ADAMTS6Q9UKP5 1117 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 PPM1HQ9ULR3 514 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 LRCH1Q9Y2L9 728 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS50-202ENST00000305866 RPS6KL1Q9Y6S9 549 aa5.73□□□□□ -1.49
VPS50-202ENST00000305866 SCN1AP35498 2009 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 VWA5AO00534 786 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms