RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 UBA6A0AVT1 1052 aaPredicted RBP20.12■□□□□ 0.81
TSR1-201ENST00000301364 RARAP10276 462 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 LRRC36Q1X8D7 754 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 SV2CQ496J9 727 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 CDC26Q8NHZ8 85 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 PDCD6IPQ8WUM4 868 aaKnown RBP20.12■□□□□ 0.81
TSR1-201ENST00000301364 APOA4P06727 396 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 LAMB3Q13751 1172 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 C2orf69Q8N8R5 385 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 APBB2Q92870 758 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 ARHGEF38Q9NXL2 777 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 CDYLQ9Y232 598 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 ADCY3O60266 1144 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 PTGER2P43116 358 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 SLC26A11Q86WA9 606 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 URGCPQ8TCY9 931 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 GFM2Q969S9 779 aaKnown RBP20.11■□□□□ 0.81
TSR1-201ENST00000301364 DNAJC19Q96DA6 116 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 LBHD1Q9BQE6 289 aaPredicted RBP20.11■□□□□ 0.81
TSR1-201ENST00000301364 KCNMB3Q9NPA1 279 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 LRRC4BQ9NT99 713 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 SLC8A2Q9UPR5 921 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 AIM2O14862 343 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 GFAPP14136 432 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 VEGFAP15692 232 aaPredicted RBP20.11■□□□□ 0.81
TSR1-201ENST00000301364 DCAF6Q58WW2 860 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 NAPEPLDQ6IQ20 393 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 ARHGEF19Q8IW93 802 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 ZNF669Q96BR6 464 aaPredicted RBP20.11■□□□□ 0.81
TSR1-201ENST00000301364 TMEM121Q9BTD3 319 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 SLC4A7Q9Y6M7 1214 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 RCCD1A6NED2 376 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 SYCE1LA8MT33 242 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 VCPP55072 806 aaKnown RBP20.11■□□□□ 0.81
TSR1-201ENST00000301364 MPZL3Q6UWV2 235 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 PCYOX1LQ8NBM8 494 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 CALB2P22676 271 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 PNPLA4P41247 253 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 CPA2P48052 419 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 INPP1P49441 399 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 TTMPQ5BVD1 217 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 YTHDF3Q7Z739 585 aaKnown RBP20.11■□□□□ 0.81
TSR1-201ENST00000301364 AFG1LQ8WV93 481 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 CNPY3Q9BT09 278 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 PXMP2Q9NR77 195 aa20.11■□□□□ 0.81
TSR1-201ENST00000301364 NFIBO00712 420 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 FSBPO95073 299 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 KCNT1Q5JUK3 1230 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 FOXR1Q6PIV2 292 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 SUGP1Q8IWZ8 645 aaKnown RBP20.1■□□□□ 0.81
TSR1-201ENST00000301364 EME1Q96AY2 570 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 ANKRD27Q96NW4 1050 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 ELP3Q9H9T3 547 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 CISHQ9NSE2 258 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 DCDC2Q9UHG0 476 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 FGRP09769 529 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 FUT2Q10981 343 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 ANGEL2Q5VTE6 544 aaKnown RBP20.1■□□□□ 0.81
TSR1-201ENST00000301364 TATDN2Q93075 761 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 TMA16Q96EY4 203 aaKnown RBP20.1■□□□□ 0.81
TSR1-201ENST00000301364 SEZ6Q53EL9 994 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 CENPTQ96BT3 561 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 SPON2Q9BUD6 331 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 SARS2Q9NP81 518 aaKnown RBP20.1■□□□□ 0.81
TSR1-201ENST00000301364 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.1■□□□□ 0.81
TSR1-201ENST00000301364 DLGAP2Q9P1A6 1054 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 SYNPO2Q9UMS6 1093 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 ZBBXA8MT70 800 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 GNL1P36915 607 aaPredicted RBP20.1■□□□□ 0.81
TSR1-201ENST00000301364 RCN1Q15293 331 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 ACTL9Q8TC94 416 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 PPP1R36Q96LQ0 422 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 IDI2Q9BXS1 227 aa20.1■□□□□ 0.81
TSR1-201ENST00000301364 LOC100653049A0A140TA62 436 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 DNALI1O14645 258 aaPredicted RBP20.09■□□□□ 0.81
TSR1-201ENST00000301364 EPHB6O15197 1021 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 KRT34O76011 436 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 CNTFP26441 200 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 PTPN4P29074 926 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 GRAMD4Q6IC98 578 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 HAS1Q92839 578 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 SLC38A7Q9NVC3 462 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.09■□□□□ 0.81
TSR1-201ENST00000301364 PDP2Q9P2J9 529 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 GGA2Q9UJY4 613 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 ATP6V1G2O95670 118 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 LAMC2Q13753 1193 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 KPNB1Q14974 876 aaKnown RBP20.09■□□□□ 0.81
TSR1-201ENST00000301364 PARD3BQ8TEW8 1205 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 GANQ9H2C0 597 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 ARHGAP26Q9UNA1 814 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 EML1O00423 815 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 C15orf52Q6ZUT6 534 aaKnown RBP20.09■□□□□ 0.81
TSR1-201ENST00000301364 ELMO2Q96JJ3 720 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 AURKCQ9UQB9 309 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 RIMBP3CA6NJZ7 1639 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 RIMBP3BA6NNM3 1639 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 RIMBP3Q9UFD9 1639 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 ZBTB7AO95365 584 aa20.09■□□□□ 0.81
TSR1-201ENST00000301364 RARBP10826 455 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms