RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 OTUD4Q01804 1114 aaKnown RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MYO1EQ12965 1108 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 TAF1CQ15572 869 aaPredicted RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 CLUL1Q15846 466 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 KCNV1Q6PIU1 500 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 TRIM72Q6ZMU5 477 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MICALCLQ6ZW33 695 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 MYCBPAPQ8TBZ2 947 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 CFAP57Q96MR6 1250 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 EPN3Q9H201 632 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 INPP5FQ9Y2H2 1132 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 STYXL1Q9Y6J8 313 aa9.79□□□□□ -0.84
PRDM9-201ENST00000296682 PDCD11Q14690 1871 aaKnown RBP9.79□□□□□ -0.84
PRDM9-201ENST00000296682 KAT6AQ92794 2004 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 E5RJQ4 531 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 RIPK2O43353 540 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 CNMDO75829 334 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 ATG7O95352 703 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 SURF1Q15526 300 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 TARBP2Q15633 366 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 NOL9Q5SY16 702 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 C6orf118Q5T5N4 469 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 C15orf39Q6ZRI6 1047 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 ZNF677Q86XU0 584 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 DDX27Q96GQ7 796 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 DHX35Q9H5Z1 703 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 TSPAN16Q9UKR8 245 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 MYH9P35579 1960 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 MICAL2O94851 1124 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 HOXC6P09630 235 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 RBP3P10745 1247 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 MMP8P22894 467 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 IRX4P78413 519 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 FASTKD3Q14CZ7 662 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 QPCTQ16769 361 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 GOLGA7BQ2TAP0 167 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 KDM7AQ6ZMT4 941 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 SPOCD1Q6ZMY3 1216 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 TAOK1Q7L7X3 1001 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 PNMA8AQ86V59 439 aaPredicted RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 SPATA18Q8TC71 538 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 MORC4Q8TE76 937 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 TMEM176AQ96HP8 235 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 RBM41Q96IZ5 413 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 EIF2AQ9BY44 585 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 CEP41Q9BYV8 373 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 H0YGN5 161 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 CETPP11597 493 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 ABCD1P33897 745 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 EIF3EP60228 445 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 GAD2Q05329 585 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 NME3Q13232 169 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 ACVR2BQ13705 512 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 SLC10A6Q3KNW5 377 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 GPR142Q7Z601 462 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 NME8Q8N427 588 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 CCNYQ8ND76 341 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 HASPINQ8TF76 798 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 PYROXD1Q8WU10 500 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 RXFP2Q8WXD0 754 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 CD101Q93033 1021 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 RUNDC3BQ96NL0 473 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 ELOVL4Q9GZR5 314 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 SDCBP2Q9H190 292 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 SNX25Q9H3E2 840 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 NXF3Q9H4D5 531 aaKnown RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 GBA2Q9HCG7 927 aaPredicted RBP9.78□□□□□ -0.84
PRDM9-201ENST00000296682 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 NFS1Q9Y697 457 aa9.78□□□□□ -0.84
PRDM9-201ENST00000296682 TMEM120BA0PK00 339 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 TCP11X1B4DZS4 312 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 SOCS7O14512 581 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 SMPD1P17405 629 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 ITIH2P19823 946 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 MAGEA4P43358 317 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 MNAT1P51948 309 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 EIF3BP55884 814 aaKnown RBP9.77□□□□□ -0.84
PRDM9-201ENST00000296682 RBP5P82980 135 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 MBTD1Q05BQ5 628 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 DGKDQ16760 1214 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 CCDC142Q17RM4 750 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 RCOR2Q8IZ40 523 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 CFAP36Q96G28 342 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 TRAIPQ9BWF2 469 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 ZDHHC18Q9NUE0 388 aa9.77□□□□□ -0.84
PRDM9-201ENST00000296682 COL4A4P53420 1690 aaPredicted RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 FSCN2O14926 492 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CYP1A1P04798 512 aaPredicted RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 PECAM1P16284 738 aaPredicted RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 DESP17661 470 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 MIPP30301 263 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 SSTR1P30872 391 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 DRG2P55039 364 aaKnown RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 CCL14Q16627 93 aa9.77□□□□□ -0.85
PRDM9-201ENST00000296682 PIWIL1Q96J94 861 aaKnown RBP9.77□□□□□ -0.85
PRDM9-201ENST00000296682 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms