RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 ITIH6Q6UXX5 1313 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 F8VZ95 297 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 PRRG1O14668 218 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 AP5Z1O43299 807 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 POU2F2P09086 479 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 HAPLN1P10915 354 aaPredicted RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 HOXB8P17481 243 aaPredicted RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 MAGEA11P43364 429 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 TUFMP49411 452 aaKnown RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 JAM2P57087 298 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 POLR2FP61218 127 aaKnown RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 DLX2Q07687 328 aaPredicted RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 DUSP4Q13115 394 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 RAPGEF1Q13905 1077 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 PTPN21Q16825 1174 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 ARHGAP17Q68EM7 881 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 VSTM1Q6UX27 236 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 FAM71AQ8IYT1 594 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 FUKQ8N0W3 1084 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 TTC9BQ8N6N2 239 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 C12orf29Q8N999 325 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 SLC7A14Q8TBB6 771 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 HNRNPABQ99729 332 aaKnown RBP14.07□□□□□ -0.16
CCDC42-201ENST00000293845 LPIN3Q9BQK8 851 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 B3GNT5Q9BYG0 378 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 RHOBTB2Q9BYZ6 727 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 TTYH3Q9C0H2 523 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 YIPF1Q9Y548 306 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 INSL5Q9Y5Q6 135 aa14.07□□□□□ -0.16
CCDC42-201ENST00000293845 NOTCH4Q99466 2003 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 ATP8B3O60423 1300 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 DENND4AQ7Z401 1863 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 DENND4CQ5VZ89 1909 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 FOXN3O00409 490 aaPredicted RBP14.06□□□□□ -0.16
CCDC42-201ENST00000293845 HNRNPA1P09651 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC42-201ENST00000293845 VDRP11473 427 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 KRT5P13647 590 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 PLD1Q13393 1074 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 SGO2Q562F6 1265 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 PPM1LQ5SGD2 360 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 SYCE2Q6PIF2 218 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 FAM35AQ86V20 835 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 SLC2A14Q8TDB8 520 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 PPM1EQ8WY54 764 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 IQCDQ96DY2 449 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 CYFIP2Q96F07 1278 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 MSLNLQ96KJ4 702 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
CCDC42-201ENST00000293845 NUP58Q9BVL2 599 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 EDEM3Q9BZQ6 932 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 ZNF518BQ9C0D4 1074 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 UBE2ZQ9H832 354 aaPredicted RBP14.06□□□□□ -0.16
CCDC42-201ENST00000293845 NLRC4Q9NPP4 1024 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 FAM49BQ9NUQ9 324 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 MYO6Q9UM54 1294 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 COG5Q9UP83 839 aa14.06□□□□□ -0.16
CCDC42-201ENST00000293845 OBSL1O75147 1896 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 CLDN5O00501 218 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 RFPL2O75678 378 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 CCDC130P13994 396 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 BDNFP23560 247 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 CYP2F1P24903 491 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 MGAT5BQ3V5L5 792 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 PPP1R26Q5T8A7 1209 aaPredicted RBP14.05□□□□□ -0.16
CCDC42-201ENST00000293845 CYP26C1Q6V0L0 522 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 BAP1Q92560 729 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 SMARCD1Q96GM5 515 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 CEP295NLQ96MC4 621 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 SPAG5Q96R06 1193 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 PRKD2Q9BZL6 878 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 TRIM5Q9C035 493 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 SLC27A5Q9Y2P5 690 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 EYSQ5T1H1 3165 aa14.05□□□□□ -0.16
CCDC42-201ENST00000293845 O00370 1275 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 LRG1P02750 347 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 PNMA6AP0CW24 399 aaPredicted RBP14.04□□□□□ -0.16
CCDC42-201ENST00000293845 CD19P15391 556 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 ATF6P18850 670 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 CLCN1P35523 988 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 SOX5P35711 763 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 USP8P40818 1118 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
CCDC42-201ENST00000293845 PLCB2Q00722 1185 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 ITIH3Q06033 890 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 TWF1Q12792 350 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 STILQ15468 1287 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
CCDC42-201ENST00000293845 MEA1Q16626 185 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 CACNA2D4Q7Z3S7 1137 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 VSTM4Q8IW00 320 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 SMRP1Q8NCR6 262 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 TFAP2BQ92481 460 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 HLA-CQ95604 372 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 ZNF707Q96C28 371 aaPredicted RBP14.04□□□□□ -0.16
CCDC42-201ENST00000293845 C8orf48Q96LL4 319 aa14.04□□□□□ -0.16
CCDC42-201ENST00000293845 SEPT5Q99719 369 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms