RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 OTOP1Q7RTM1 612 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 ZNF184Q99676 751 aaPredicted RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 MOV10L1Q9BXT6 1211 aaKnown RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 SLC17A7Q9P2U7 560 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 PCYOX1Q9UHG3 505 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 STRIP2Q9ULQ0 834 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 SPDYE5A6NIY4 337 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 KBTBD13C9JR72 458 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 NFIBO00712 420 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 TBC1D12O60347 775 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 PPP1R11O60927 126 aaPredicted RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 SPATA31C1P0DKV0 1188 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 RWDD4Q6NW29 188 aaKnown RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 CES3Q6UWW8 571 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 EIF1ADQ8N9N8 165 aaKnown RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 ART4Q93070 314 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
USP43-201ENST00000285199 ZNF408Q9H9D4 720 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 ARL8BQ9NVJ2 186 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 RPTORQ8N122 1335 aa16.39■□□□□ 0.21
USP43-201ENST00000285199 RPL7AP62424 266 aaKnown RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 FLOT2Q14254 428 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 PDCD2Q16342 344 aaPredicted RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 CLEC16AQ2KHT3 1053 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 KBTBD12Q3ZCT8 623 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 KHDC1Q4VXA5 237 aaKnown RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 ALYREFQ86V81 257 aaKnown RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 RFWD2Q8NHY2 731 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 UCMAQ8WVF2 138 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 OXNAD1Q96HP4 312 aaPredicted RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 APOL2Q9BQE5 337 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 CYP26B1Q9NR63 512 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 FBXO40Q9UH90 709 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 LCP1P13796 627 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 MAPK10P53779 464 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 CUL2Q13617 745 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 TFDP3Q5H9I0 405 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 DNALI1O14645 258 aaPredicted RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 SMNDC1O75940 238 aaKnown RBP eCLIP16.38■□□□□ 0.21
USP43-201ENST00000285199 GPC3P51654 580 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 WASHC2DQ5SRD0 308 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 GADL1Q6ZQY3 521 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 DCUN1D5Q9BTE7 237 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 MTMR12Q9C0I1 747 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 ETAA1Q9NY74 926 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 NKX1-2Q9UD57 310 aaPredicted RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 AKAP10O43572 662 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 CLPTM1O96005 669 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 ARHGAP22Q7Z5H3 698 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 TLCD1Q96CP7 247 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 SRPK1Q96SB4 655 aaKnown RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 LRRC4CQ9HCJ2 640 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 A1CFQ9NQ94 594 aaKnown RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
USP43-201ENST00000285199 ZMYND8Q9ULU4 1186 aaPredicted RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 CORO1CQ9ULV4 474 aaPredicted RBP16.38■□□□□ 0.21
USP43-201ENST00000285199 NELFEP18615 380 aaKnown RBP16.37■□□□□ 0.21
USP43-201ENST00000285199 HACE1Q8IYU2 909 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 ING2Q9H160 280 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 TAS2R40P59535 323 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 FMO1Q01740 532 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 PIGHQ14442 188 aaPredicted RBP16.37■□□□□ 0.21
USP43-201ENST00000285199 DSTYKQ6XUX3 929 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 NUP93Q8N1F7 819 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 NETO2Q8NC67 525 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 USP33Q8TEY7 942 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 PABPN1LA6NDY0 278 aaKnown RBP16.37■□□□□ 0.21
USP43-201ENST00000285199 MEIS2O14770 477 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 ATP6V1C1P21283 382 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 FOXN2P32314 431 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 RAP1GAPP47736 663 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 RFWD3Q6PCD5 774 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 TMEM39BQ9GZU3 492 aa16.37■□□□□ 0.21
USP43-201ENST00000285199 APOL1O14791 398 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 DCXO43602 365 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 AVILO75366 819 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 ADRB2P07550 413 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 PDGFRBP09619 1106 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 RARRES1P49788 294 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 PRKCEQ02156 737 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 C1orf186Q6ZWK4 172 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 DIS3LQ8TF46 1054 aaKnown RBP16.36■□□□□ 0.21
USP43-201ENST00000285199 SIK2Q9H0K1 926 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 TTC39BQ5VTQ0 682 aaPredicted RBP16.36■□□□□ 0.21
USP43-201ENST00000285199 IRGCQ6NXR0 463 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 DENND5BQ6ZUT9 1274 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 RNF217Q8TC41 542 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 PRPF18Q99633 342 aaKnown RBP16.36■□□□□ 0.21
USP43-201ENST00000285199 ZNF302Q9NR11 478 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 ACSS2Q9NR19 701 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 GRHL1Q9NZI5 618 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 BFARQ9NZS9 450 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 AK5Q9Y6K8 562 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 PEAK1Q9H792 1746 aa16.36■□□□□ 0.21
USP43-201ENST00000285199 SRRM3A6NNA2 597 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms