RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TDRPQ86YL5 185 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 RELL1Q8IUW5 271 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 OGFOD1Q8N543 542 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CPT1BQ92523 772 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 STX18Q9P2W9 335 aaKnown RBP13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CCPG1Q9ULG6 757 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 PPM1HQ9ULR3 514 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 COQ4Q9Y3A0 265 aa13.54□□□□□ -0.24
COL8A1-202ENST00000273342 CST8O60676 142 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 OPHN1O60890 802 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 SORBS2O94875 1100 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 CD48P09326 243 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 OCRLQ01968 901 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 MCL1Q07820 350 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 ZNF252P-AS1Q0IIN9 211 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 BMPR2Q13873 1038 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 ZRSR2Q15696 482 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 EFHC2Q5JST6 749 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 TDRD10Q5VZ19 366 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 CEP120Q8N960 986 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 PYDC1Q8WXC3 89 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 RSAD2Q8WXG1 361 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 CEP170P1Q96L14 293 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 APOBEC3GQ9HC16 384 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 XPO7Q9UIA9 1087 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 MRPL11Q9Y3B7 192 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 hCG_2014768A0A024R1R8 64 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 CHRNA5P30532 468 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 PHBP35232 272 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 NLRP11P59045 1033 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 TMPRSS15P98073 1019 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 USP4Q13107 963 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 VPS72Q15906 364 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 POU5F2Q8N7G0 328 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 GATA6Q92908 595 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 SKA1Q96BD8 255 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 GORASP1Q9BQQ3 440 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 TXNDC9O14530 226 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 ANPEPP15144 967 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 BRD2P25440 801 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 ELK3P41970 407 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 EPHB1P54762 984 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 RTP1P59025 263 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 CUL3Q13618 768 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 TKFCQ3LXA3 575 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 PRPF39Q86UA1 669 aaKnown RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 C12orf56Q8IXR9 622 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 RCOR2Q8IZ40 523 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 ABRAQ8N0Z2 381 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 GPD1LQ8N335 351 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 PPM1NQ8N819 430 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 DCAKDQ8WVC6 231 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 IFT43Q96FT9 208 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
COL8A1-202ENST00000273342 ZDHHC15Q96MV8 337 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 PANX3Q96QZ0 392 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 RIT2Q99578 217 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 TJP2Q9UDY2 1190 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
COL8A1-202ENST00000273342 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.24
COL8A1-202ENST00000273342 ANKRD33BA6NCL7 494 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 IRF6O14896 467 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 INHBAP08476 426 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 RARBP10826 455 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 RPL22P35268 128 aaKnown RBP13.52□□□□□ -0.24
COL8A1-202ENST00000273342 MRPS9P82933 396 aaKnown RBP13.52□□□□□ -0.24
COL8A1-202ENST00000273342 AOC3Q16853 763 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 SCARA5Q6ZMJ2 495 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 GSTCDQ8NEC7 633 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 CERKQ8TCT0 537 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 EZH1Q92800 747 aaPredicted RBP13.52□□□□□ -0.24
COL8A1-202ENST00000273342 RANBP17Q9H2T7 1088 aaKnown RBP13.52□□□□□ -0.24
COL8A1-202ENST00000273342 PARVAQ9NVD7 372 aa13.52□□□□□ -0.24
COL8A1-202ENST00000273342 ZNFX1Q9P2E3 1918 aaKnown RBP13.52□□□□□ -0.25
COL8A1-202ENST00000273342 MMP10P09238 476 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 GTF2H1P32780 548 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 GCNT1Q02742 428 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 TRAF1Q13077 416 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 TAF5Q15542 800 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.25
COL8A1-202ENST00000273342 LPCAT4Q643R3 524 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 DNAJC24Q6P3W2 148 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 ADGRD1Q6QNK2 874 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms