RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CDH16O75309 829 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 DCTN3O75935 186 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 TJP3O95049 919 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 ITIH2P19823 946 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 KIF22Q14807 665 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 CCDC6Q16204 474 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 SGO2Q562F6 1265 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 PTPRN2Q92932 1015 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 CD101Q93033 1021 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 C9orf72Q96LT7 481 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 ST6GALNAC4Q9H4F1 302 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 LRRC19Q9H756 370 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 ATXN10Q9UBB4 475 aa16.78■□□□□ 0.28
MAP1LC3B-201ENST00000268607 SLC25A27O95847 323 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 VHLP40337 213 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 ACBD5Q5T8D3 534 aaPredicted RBP16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 ABHD15Q6UXT9 468 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 TAS1R3Q7RTX0 852 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 DNERQ8NFT8 737 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 NRG4Q8WWG1 115 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 SNF8Q96H20 258 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 IWS1Q96ST2 819 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 LGALS13Q9UHV8 139 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 ZNF232Q9UNY5 417 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 EXOC7Q9UPT5 735 aa16.77■□□□□ 0.28
MAP1LC3B-201ENST00000268607 ASMTLO95671 621 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SKIP12755 728 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 IVDP26440 423 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RASSF2P50749 326 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TAF1CQ15572 869 aaPredicted RBP16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RGMBQ6NW40 437 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 DPP9Q86TI2 863 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 STOML1Q9UBI4 398 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 GRID1Q9ULK0 1009 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 LOXHD1Q8IVV2 1947 aa16.77■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MAFGO15525 162 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ATP6V1G1O75348 118 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CNPY1Q3B7I2 92 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 XRRA1Q6P2D8 792 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 DSTYKQ6XUX3 929 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 GPR142Q7Z601 462 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 C12orf50Q8NA57 414 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MIPEPQ99797 713 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TIPINQ9BVW5 301 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TCEA3O75764 348 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FKBP1BP68106 108 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RCN1Q15293 331 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 KRT39Q6A163 491 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SV2AQ7L0J3 742 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ARMCX2Q7L311 632 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ANAPC5Q9UJX4 755 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 IVNS1ABPQ9Y6Y0 642 aa16.76■□□□□ 0.27
MAP1LC3B-201ENST00000268607 DNAJC25-GNG10A0A024R161 153 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 DGAT1O75907 488 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 UBTFL6P0CB48 400 aaPredicted RBP16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ZCCHC18P0CG32 403 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 PTPN4P29074 926 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ADCY8P40145 1251 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ACOT2P49753 483 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 WNT7BP56706 349 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TMEM62Q0P6H9 643 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MTA1Q13330 715 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 C4orf50Q6ZRC1 276 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 PHLDB2Q86SQ0 1253 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 EPS8L1Q8TE68 723 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 C10orf82Q8WW14 230 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 GATA6Q92908 595 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 AZIN2Q96A70 460 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SENP7Q9BQF6 1050 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NUMBLQ9Y6R0 609 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MAGEB2O15479 319 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 AOC2O75106 756 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 FARP2O94887 1054 aaPredicted RBP16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 CYP1A1P04798 512 aaPredicted RBP16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ETS2P15036 469 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SEZ6Q53EL9 994 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ANKRD23Q86SG2 305 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 RDM1Q8NG50 284 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NTPCRQ9BSD7 190 aaKnown RBP16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ZFP69BQ9UJL9 534 aa16.75■□□□□ 0.27
MAP1LC3B-201ENST00000268607 MAGEA13PA6NCF6 341 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 EDF1O60869 148 aaKnown RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 KRT36O76013 467 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 LMNAP02545 664 aaKnown RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SPATA31D3P0C874 917 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TXNP10599 105 aaKnown RBP16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 ADCYAP1R1P41586 468 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 INHBCP55103 352 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 DBN1Q16643 649 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SPATA31D4Q6ZUB0 917 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 SESTD1Q86VW0 696 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 NPLOC4Q8TAT6 608 aa16.74■□□□□ 0.27
MAP1LC3B-201ENST00000268607 TRAPPC12Q8WVT3 735 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms