RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 PPP1R12CQ9BZL4 782 aa25.84■■□□□ 1.73
R3HCC1-201ENST00000265806 SYNCQ9H7C4 482 aa25.84■■□□□ 1.73
R3HCC1-201ENST00000265806 PCDHB7Q9Y5E2 793 aa25.84■■□□□ 1.73
R3HCC1-201ENST00000265806 SCN5AQ14524 2016 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 M0QZQ0 153 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 CYP11A1P05108 521 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 ODC1P11926 461 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 MAN1A1P33908 653 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 CTNNA1P35221 906 aaKnown RBP25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 PSMC1P62191 440 aaKnown RBP25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 RPL7AP62424 266 aaKnown RBP25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 TCTN1Q2MV58 587 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 SPATA4Q8NEY3 305 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 ALG3Q92685 438 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 MCRS1Q96EZ8 462 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 LPIN3Q9BQK8 851 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 TBC1D13Q9NVG8 400 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 DDX43Q9NXZ2 648 aaKnown RBP25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 EHD2Q9NZN4 543 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 IP6K2Q9UHH9 426 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 PCDHA3Q9Y5H8 950 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 TTC3P53804 2025 aa25.83■■□□□ 1.73
R3HCC1-201ENST00000265806 SIGLEC16A6NMB1 481 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 CAPN2P17655 700 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 PTPN1P18031 435 aaKnown RBP25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 CYP2C18P33260 490 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 PEX5P50542 639 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 BCAT1P54687 386 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 DCAF12L1Q5VU92 463 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 COLGALT2Q8IYK4 626 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 KRT35Q92764 455 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 C11orf49Q9H6J7 331 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 TTC7AQ9ULT0 858 aaPredicted RBP25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 CEP104O60308 925 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 DDHD2O94830 711 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 GJB6O95452 261 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 CCDC130P13994 396 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 BST2Q10589 180 aaKnown RBP25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 DCUN1D2Q6PH85 259 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 ZNF280BQ86YH2 543 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 CPNE8Q86YQ8 564 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 CRIPAKQ8N1N5 446 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 NOA1Q8NC60 698 aaKnown RBP25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 MCEEQ96PE7 176 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 HNRNPABQ99729 332 aaKnown RBP25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 SLC4A5Q9BY07 1137 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 SMARCAL1Q9NZC9 954 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 DSEQ9UL01 958 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 ATP11BQ9Y2G3 1177 aa25.82■■□□□ 1.72
R3HCC1-201ENST00000265806 ARHGEF37A1IGU5 675 aa25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 TMEM189-UBE2V1I3L0A0 370 aa25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 PDE4CQ08493 712 aa25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 PMF1Q6P1K2 205 aa25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 TMEM110Q86TL2 294 aa25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 GPR161Q8N6U8 529 aaKnown RBP25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 RSPH1Q8WYR4 309 aa25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 SUSD3Q96L08 255 aa25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.81■■□□□ 1.72
R3HCC1-201ENST00000265806 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 B4GALT3O60512 393 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 KRT3P12035 628 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 BRCC3P46736 316 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 SNX16P57768 344 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 ABI1Q8IZP0 508 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 SLC2A14Q8TDB8 520 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 FNIP1Q8TF40 1166 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 PAWRQ96IZ0 340 aaKnown RBP25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 CYLDQ9NQC7 956 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 ST7Q9NRC1 585 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 RNF216Q9NWF9 866 aaPredicted RBP25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 CDH9Q9ULB4 789 aa25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 TIMM13Q9Y5L4 95 aaPredicted RBP25.8■■□□□ 1.72
R3HCC1-201ENST00000265806 PGRMC1O00264 195 aaKnown RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 HOXA2O43364 376 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 ATP2C2O75185 946 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 ACAT1P24752 427 aaKnown RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 PCSK1P29120 753 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 ADORA2BP29275 332 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 MARCKSL1P49006 195 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 RPL34P49207 117 aaKnown RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 PAN2Q504Q3 1202 aaKnown RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 KIAA0319Q5VV43 1072 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 NIPA2Q8N8Q9 360 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 SYT15Q9BQS2 421 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 TMEM39AQ9NV64 488 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 LRFN2Q9ULH4 789 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 E5RJQ4 531 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 GOLGA8SH3BPF8 625 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 TULP2O00295 520 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 CLTBP09497 229 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 HSPA1AP0DMV8 641 aaKnown RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 HSPA1BP0DMV9 641 aaKnown RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 RNASELQ05823 741 aaKnown RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 PIGHQ14442 188 aaPredicted RBP25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 METTL23Q86XA0 190 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 FUKQ8N0W3 1084 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 MMGT1Q8N4V1 131 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 ANKRD7Q92527 254 aa25.79■■□□□ 1.72
R3HCC1-201ENST00000265806 CASD1Q96PB1 797 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms