RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SYDE1Q6ZW31 735 aaPredicted RBP20.77■□□□□ 0.92
CSPG5-201ENST00000264723 MAP4K3Q8IVH8 894 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 PRMT7Q9NVM4 692 aaPredicted RBP20.77■□□□□ 0.92
CSPG5-201ENST00000264723 PSMC3IPQ9P2W1 217 aaPredicted RBP20.77■□□□□ 0.92
CSPG5-201ENST00000264723 NPTXRO95502 500 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 EPHB1P54762 984 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 ITIH4Q14624 930 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 CCNG2Q16589 344 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 NXNQ6DKJ4 435 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 SLC9A9Q8IVB4 645 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 FBXO36Q8NEA4 188 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 ASAP3Q8TDY4 903 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 ART4Q93070 314 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 CCDC124Q96CT7 223 aaKnown RBP20.77■□□□□ 0.92
CSPG5-201ENST00000264723 MBOAT7Q96N66 472 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 OSBPL1AQ9BXW6 950 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 ZMYM2Q9UBW7 1377 aa20.77■□□□□ 0.92
CSPG5-201ENST00000264723 H0YGN5 161 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 SLC4A1P02730 911 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 MYBPC2Q14324 1141 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 PLCB4Q15147 1175 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 CATSPERGQ6ZRH7 1159 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 NIPA1Q7RTP0 329 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 MTDHQ86UE4 582 aaKnown RBP20.77■□□□□ 0.91
CSPG5-201ENST00000264723 SUFUQ9UMX1 484 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 NFS1Q9Y697 457 aa20.77■□□□□ 0.91
CSPG5-201ENST00000264723 ENO4A6NNW6 628 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ENO1P06733 434 aaKnown RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 SERPINB6P35237 376 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 PTGIRP43119 386 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 CENPCQ03188 943 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 AGAP11Q8TF27 550 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 WNK4Q96J92 1243 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 SPDYE16A6NNV3 312 aaPredicted RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ADSSP30520 456 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 PTGER2P43116 358 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ROR1Q01973 937 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 YTHDF3Q7Z739 585 aaKnown RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 SMC1BQ8NDV3 1235 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 CYP4F11Q9HBI6 524 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ZDHHC18Q9NUE0 388 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 STAMBPO95630 424 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 CYP1A2P05177 515 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ECHS1P30084 290 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ZNF157P51786 506 aaPredicted RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 NR1H3Q13133 447 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 ACCSLQ4AC99 568 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 TDRD10Q5VZ19 366 aaKnown RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 METTL23Q86XA0 190 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 TTC13Q8NBP0 860 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 C3orf20Q8ND61 904 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 DEPDC1BQ8WUY9 529 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 CCDC97Q96F63 343 aaPredicted RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 SCYL1Q96KG9 808 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 PPP1R36Q96LQ0 422 aa20.76■□□□□ 0.91
CSPG5-201ENST00000264723 PIH1D1Q9NWS0 290 aaKnown RBP20.76■□□□□ 0.91
CSPG5-201ENST00000264723 MYH3P11055 1940 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 KLRG2A4D1S0 409 aaPredicted RBP20.75■□□□□ 0.91
CSPG5-201ENST00000264723 MAGEB2O15479 319 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 SESN2P58004 480 aaPredicted RBP20.75■□□□□ 0.91
CSPG5-201ENST00000264723 SPRED3Q2MJR0 410 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 SPOCD1Q6ZMY3 1216 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 HELQQ8TDG4 1101 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 TSSK1BQ9BXA7 367 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 UMODL1Q5DID0 1318 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 PLIN4Q96Q06 1357 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 KRT37O76014 449 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 CFHP08603 1231 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 PTK7Q13308 1070 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 FASTKD3Q14CZ7 662 aaKnown RBP20.75■□□□□ 0.91
CSPG5-201ENST00000264723 CDKL2Q92772 493 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 CDCA5Q96FF9 252 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 RPA3P35244 121 aaPredicted RBP20.75■□□□□ 0.91
CSPG5-201ENST00000264723 TREML2Q5T2D2 321 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 PCGF5Q86SE9 256 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 ACOT1Q86TX2 421 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 CYP4X1Q8N118 509 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 IFT122Q9HBG6 1241 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 CPA4Q9UI42 421 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 FIS1Q9Y3D6 152 aa20.75■□□□□ 0.91
CSPG5-201ENST00000264723 DRG2P55039 364 aaKnown RBP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 LAMC2Q13753 1193 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 DCLK2Q8N568 766 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 SETD4Q9NVD3 440 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 HEY2Q9UBP5 337 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 H3BRB1 525 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 STAG3L1P0CL83 205 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 ALDH18A1P54886 795 aaKnown RBP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 MAMLD1Q13495 774 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 KLHL38Q2WGJ6 581 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 RAPH1Q70E73 1250 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 GPC2Q8N158 579 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 NT5C1AQ9BXI3 368 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 TUT1Q9H6E5 874 aaKnown RBP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 KLHL8Q9P2G9 620 aaPredicted RBP20.74■□□□□ 0.91
CSPG5-201ENST00000264723 GLRA2P23416 452 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 TNFSF9P41273 254 aa20.74■□□□□ 0.91
CSPG5-201ENST00000264723 POLE2P56282 527 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms