RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 BEST2Q8NFU1 509 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 ATL2Q8NHH9 583 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 TRIB2Q92519 343 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 RBM41Q96IZ5 413 aaKnown RBP12.48□□□□□ -0.41
CASQ2-201ENST00000261448 TMBIM4Q9HC24 238 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 PARP2Q9UGN5 583 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 GABRQQ9UN88 632 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 PIK3R2O00459 728 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 PIRO00625 290 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 HCRTO43612 131 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 CYBAP13498 195 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 SOX4Q06945 474 aaPredicted RBP12.48□□□□□ -0.41
CASQ2-201ENST00000261448 SREBF2Q12772 1141 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 PTK6Q13882 451 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 TRIP13Q15645 432 aaPredicted RBP12.48□□□□□ -0.41
CASQ2-201ENST00000261448 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 GNASQ5JWF2 1037 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 ZFYVE27Q5T4F4 411 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 UBAP2Q5T6F2 1119 aaKnown RBP12.48□□□□□ -0.41
CASQ2-201ENST00000261448 KAZNQ674X7 775 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 PIWIL1Q96J94 861 aaKnown RBP12.48□□□□□ -0.41
CASQ2-201ENST00000261448 LPIN3Q9BQK8 851 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
CASQ2-201ENST00000261448 TULP2O00295 520 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 SPTLC1O15269 473 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 CA12O43570 354 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 GNAT1P11488 350 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 ATF7P17544 494 aaPredicted RBP12.47□□□□□ -0.41
CASQ2-201ENST00000261448 CAPN2P17655 700 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 CDKN2BP42772 138 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 PMS2P54278 862 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 SPDYCQ5MJ68 293 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 TRNP1Q6NT89 227 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 ATP6V1G3Q96LB4 118 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 PABPC3Q9H361 631 aaKnown RBP12.47□□□□□ -0.41
CASQ2-201ENST00000261448 UBQLN1Q9UMX0 589 aaKnown RBP12.47□□□□□ -0.41
CASQ2-201ENST00000261448 IPPQ9Y573 584 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 hCG_1818297A0A087WSY0 165 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 E5RJQ4 531 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 PGK1P00558 417 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 KCNE1P15382 129 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 PSMC4P43686 418 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 GJA9P57773 515 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 SMTNL2Q2TAL5 461 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 DNAJC21Q5F1R6 531 aaKnown RBP12.47□□□□□ -0.41
CASQ2-201ENST00000261448 TFDP3Q5H9I0 405 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 KCNT1Q5JUK3 1230 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 RHBDF2Q6PJF5 856 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 CXCL17Q6UXB2 119 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
CASQ2-201ENST00000261448 POLNQ7Z5Q5 900 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 FAM228AQ86W67 206 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 TTC30AQ86WT1 665 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 GRK7Q8WTQ7 553 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 CCDC114Q96M63 670 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 SEMA4AQ9H3S1 761 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 GOLGA2P5Q9HBQ8 144 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 WHRNQ9P202 907 aa12.47□□□□□ -0.41
CASQ2-201ENST00000261448 LRRD1A4D1F6 860 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 GABBR2O75899 941 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 TJP3O95049 919 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 PTPN7P35236 360 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 COPS2P61201 443 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 CAP1Q01518 475 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 TRIM32Q13049 653 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 PMF1Q6P1K2 205 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 KBTBD7Q8WVZ9 684 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 WNT8BQ93098 351 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 DPEP3Q9H4B8 488 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 ZWILCHQ9H900 591 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 AAASQ9NRG9 546 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 FAM49BQ9NUQ9 324 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 DDX56Q9NY93 547 aaKnown RBP12.46□□□□□ -0.41
CASQ2-201ENST00000261448 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 FEZ2Q9UHY8 353 aaPredicted RBP12.46□□□□□ -0.41
CASQ2-201ENST00000261448 DNPEPQ9ULA0 475 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 LIASO43766 372 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 SHOX2O60902 331 aaPredicted RBP12.46□□□□□ -0.41
CASQ2-201ENST00000261448 GAS8O95995 478 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 SHBGP04278 402 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 MYZAPP0CAP1 466 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 FGFR1P11362 822 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 ITIH2P19823 946 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 TAF5Q15542 800 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 NBPF20Q3BBV1 942 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 FBXO47Q5MNV8 452 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 ZNF618Q5T7W0 954 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 FAM102AQ5T9C2 384 aaPredicted RBP12.46□□□□□ -0.41
CASQ2-201ENST00000261448 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 FAM183BPQ6ZVS7 135 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 OR6B3Q8NGW1 331 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
CASQ2-201ENST00000261448 GTF2IRD1Q9UHL9 959 aa12.46□□□□□ -0.41
CASQ2-201ENST00000261448 KPNA7A9QM74 516 aa12.45□□□□□ -0.42
CASQ2-201ENST00000261448 CD4P01730 458 aa12.45□□□□□ -0.42
CASQ2-201ENST00000261448 LMO2P25791 158 aa12.45□□□□□ -0.42
CASQ2-201ENST00000261448 KLRC2P26717 231 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms