RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ATL2Q8NHH9 583 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF564Q8TBZ8 553 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 FGD4Q96M96 766 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 PCDHB2Q9Y5E7 798 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 LRRC37A2A6NM11 1700 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 FOXO6A8MYZ6 492 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 ADCY3O60266 1144 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 CCDC22O60826 627 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 ENTPD5O75356 428 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 MAFO75444 373 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 DDNO94850 711 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 SOX10P56693 466 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 SLC34A1Q06495 639 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 LAMB3Q13751 1172 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 MXD4Q14582 209 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 KPNB1Q14974 876 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 SNX30Q5VWJ9 437 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 USP50Q70EL3 339 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 PLPPR4Q7Z2D5 763 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 C1orf54Q8WWF1 131 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 GATA6Q92908 595 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 KAT5Q92993 513 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 CFAP57Q96MR6 1250 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 NR1H4Q96RI1 486 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 CGRRF1Q99675 332 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 NUP85Q9BW27 656 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 ASCC2Q9H1I8 757 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 C2orf40Q9H1Z8 148 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 PIDD1Q9HB75 910 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 SPON1Q9HCB6 807 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 SSU72Q9NP77 194 aaKnown RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 AVENQ9NQS1 362 aaPredicted RBP11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 TBK1Q9UHD2 729 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 ZFP69BQ9UJL9 534 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 NEU2Q9Y3R4 380 aa11.37□□□□□ -0.59
CHRNA1-201ENST00000261007 A0A0B4J269 797 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 EIF4E1BA6NMX2 242 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 H0Y3Z8 333 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 CLDN3O15551 220 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 LGR5O75473 907 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 UPP2O95045 317 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 C4BPAP04003 597 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TNNI1P19237 187 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ADCY8P40145 1251 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 PIK3CAP42336 1068 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 AP1B1Q10567 949 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 KCTD2Q14681 263 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 KHDC1Q4VXA5 237 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TAF1BQ53T94 588 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 RNF220Q5VTB9 566 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 FYB2Q5VWT5 728 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF449Q6P9G9 518 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ARHGAP22Q7Z5H3 698 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ANKS1BQ7Z6G8 1248 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 CCDC89Q8N998 374 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 PPFIBP2Q8ND30 876 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 SHCBP1Q8NEM2 672 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TMEM143Q96AN5 459 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TTC25Q96NG3 672 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 PCDHB18PQ96TA0 734 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 PAIP2Q9BPZ3 127 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 MSTO1Q9BUK6 570 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 DCLK3Q9C098 648 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 MMADHCQ9H3L0 296 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 MROH8Q9H579 483 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 RBAKQ9NYW8 714 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ZNF212Q9UDV6 495 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 SLC4A7Q9Y6M7 1214 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 MAP3K13O43283 966 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 KRT5P13647 590 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TCF7P36402 384 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 RCN2Q14257 317 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TMED2Q15363 201 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 CLEC16AQ2KHT3 1053 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 NLRP9Q7RTR0 991 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 SCG3Q8WXD2 468 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 DDX1Q92499 740 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 EZH1Q92800 747 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 SMC6Q96SB8 1091 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 PCYT2Q99447 389 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 BTBD10Q9BSF8 475 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 MRPL4Q9BYD3 311 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 IMPG2Q9BZV3 1241 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TRABDQ9H4I3 376 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 SYNCQ9H7C4 482 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ELP3Q9H9T3 547 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 DMAP1Q9NPF5 467 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 TOPORSQ9NS56 1045 aaPredicted RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 RNF181Q9P0P0 153 aa11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 STX18Q9P2W9 335 aaKnown RBP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHRNA1-201ENST00000261007 ADGRA2Q96PE1 1338 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms