RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CEP250Q9BV73 2442 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 COL1A2P08123 1366 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 ENPEPQ07075 957 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 C15orf59Q2T9L4 293 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 UNC5BQ8IZJ1 945 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC39A13Q96H72 371 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 SAMD11Q96NU1 681 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 POLR3BQ9NW08 1133 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 IKZF3Q9UKT9 509 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 PCDHGC3Q9UN70 934 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CCL26Q9Y258 94 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 PCDHB13Q9Y5F0 798 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CTAGE15A4D2H0 777 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 C2CD4BA6NLJ0 364 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC26A4O43511 780 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 BANF1O75531 89 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 MOCS3O95396 460 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CCDC192P0DO97 292 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 MLH1P40692 756 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 GRM5P41594 1212 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 VAMP7P51809 220 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 KIF11P52732 1056 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 GCNT1Q02742 428 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 FAM133BQ5BKY9 247 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 TMEM240Q5SV17 173 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 ANKRD22Q5VYY1 191 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CCDC73Q6ZRK6 1079 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CTAGE6Q86UF2 777 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CRYBG2Q8N1P7 616 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CCDC185Q8N715 623 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 RNF25Q96BH1 459 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 PRDM8Q9NQV8 689 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 PICK1Q9NRD5 415 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 DRG1Q9Y295 367 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 GON4LQ3T8J9 2241 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC16A3O15427 465 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 ZSCAN5DPP0CG00 497 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SRGAP2CP0DJJ0 459 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 GABRB3P28472 473 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SOX18P35713 384 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 KCTD11Q693B1 232 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 DPY19L2Q6NUT2 758 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 ZSCAN30Q86W11 494 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 MIB1Q86YT6 1006 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 IQCKQ8N0W5 287 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SMC1BQ8NDV3 1235 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 TMC2Q8TDI7 906 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CPA5Q8WXQ8 436 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 ZNF396Q96N95 335 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 UBN1Q9NPG3 1134 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CISHQ9NSE2 258 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 RAB20Q9NX57 234 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SUCLA2Q9P2R7 463 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SEPT9Q9UHD8 586 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 TIMM13Q9Y5L4 95 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CLTAP09496 248 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC6A4P31645 630 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP2J2P51589 502 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 GAREM2Q75VX8 874 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SV2BQ7L1I2 683 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 EMC1Q8N766 993 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 OXNAD1Q96HP4 312 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 RPP25Q9BUL9 199 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CNOT8Q9UFF9 292 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SPAG17Q6Q759 2223 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CTNNA2P26232 953 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 GGCXP38435 758 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 TFF2Q03403 129 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CELF4Q9BZC1 486 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 MAGEC2Q9UBF1 373 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 WFS1O76024 890 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 MAPK4P31152 587 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SFNP31947 248 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 GRM1Q13255 1194 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 MIER3Q7Z3K6 550 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CBARPQ8N350 705 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CMASQ8NFW8 434 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 WASF1Q92558 559 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SYN2Q92777 582 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 TOP1MTQ969P6 601 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 PCED1BQ96HM7 432 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 CLEC1BQ9P126 229 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC17A6Q9P2U8 582 aa6.05□□□□□ -1.44
TOPBP1-201ENST00000260810 GOLGA6L3A6NEY3 463 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 GPR39O43194 453 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 TBX18O95935 607 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 HNRNPLP14866 589 aaKnown RBP eCLIP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 FGFR3P22607 806 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 UBA7P41226 1012 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ERCC6LQ2NKX8 1250 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 TSR1Q2NL82 804 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 PPP4R3BQ5MIZ7 849 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 C14orf80Q86SX3 495 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ECHDC2Q86YB7 292 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 TMEM151BQ8IW70 566 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 MCOLN2Q8IZK6 566 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 MSANTD4Q8NCY6 345 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 MAGEF1Q9HAY2 307 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 PDFQ9HBH1 243 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 KCNU1A8MYU2 1149 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms