RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 WDR27A2RRH5 827 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 CLDN5O00501 218 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 MMEP08473 750 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 CDK17Q00537 523 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 CDR2Q01850 454 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 GPR17Q13304 367 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 RNF19BQ6ZMZ0 732 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 TMEM139Q8IV31 216 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 PGLYRP2Q96PD5 576 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 HNRNPABQ99729 332 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 AGPAT1Q99943 283 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 TSPAN16Q9UKR8 245 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 MYO7AQ13402 2215 aa16.78■□□□□ 0.28
CCDC90B-201ENST00000260054 PTMAP06454 111 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 ADORA2BP29275 332 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 FMO1Q01740 532 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 CREMQ03060 361 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 BMS1Q14692 1282 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 MAPRE1Q15691 268 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 CNGA2Q16280 664 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 GOLGA7BQ2TAP0 167 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 LCLAT1Q6UWP7 414 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 ZNF677Q86XU0 584 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 LRRC8AQ8IWT6 810 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 KLHL5Q96PQ7 755 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 RHOBTB2Q9BYZ6 727 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 ZNF518BQ9C0D4 1074 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 LMAN2LQ9H0V9 348 aa16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 TTYH1Q9H313 450 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 BZW2Q9Y6E2 419 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-201ENST00000260054 COL4A4P53420 1690 aaPredicted RBP16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 MTMR11A4FU01 709 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 MED7O43513 233 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 MICAL2O94851 1124 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 VNN2O95498 520 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 EIF4A3P38919 411 aaKnown RBP16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 NDUFV1P49821 464 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 RAB33AQ14088 237 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 NFE2Q16621 373 aaPredicted RBP16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 FAM35AQ86V20 835 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 TTC30AQ86WT1 665 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 PALB2Q86YC2 1186 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 PCDHB18PQ96TA0 734 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 BAG1Q99933 345 aaPredicted RBP16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 PCDHGC3Q9UN70 934 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 MYO9BQ13459 2157 aa16.76■□□□□ 0.27
CCDC90B-201ENST00000260054 TMEM265A0A087WTH1 108 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 STILQ15468 1287 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 PKDCCQ504Y2 493 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 PDE12Q6L8Q7 609 aaKnown RBP16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 DENND1BQ6P3S1 775 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 C4orf50Q6ZRC1 276 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 SPATA2LQ8IUW3 424 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 PASD1Q8IV76 773 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 TTC9BQ8N6N2 239 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ATAD1Q8NBU5 361 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ZNF461Q8TAF7 563 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 LRCH3Q96II8 777 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 MED10Q9BTT4 135 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 EMILIN2Q9BXX0 1053 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 CRISPLD1Q9H336 500 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 NHEJ1Q9H9Q4 299 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 TMEM30AQ9NV96 361 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ABI2Q9NYB9 513 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 SSU72P8A0A1W2PR75 194 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 SOWAHDA6NJG2 315 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 M0QYV0 167 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 DDX3XO00571 662 aaKnown RBP eCLIP16.75■□□□□ 0.272e-15■■■■■ 36.8
CCDC90B-201ENST00000260054 ABLIM3O94929 683 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ADH1AP07327 375 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 BDNFP23560 247 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 CACNA2D1P54289 1103 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 SMARCB1Q12824 385 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ASTE1Q2TB18 679 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 CFAP221Q4G0U5 840 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ANKRD52Q8NB46 1076 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 UBA3Q8TBC4 463 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 KRT82Q9NSB4 513 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ADAMTS1Q9UHI8 967 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 PCDHB5Q9Y5E4 795 aa16.75■□□□□ 0.27
CCDC90B-201ENST00000260054 ATG2AQ2TAZ0 1938 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 FAM170AA1A519 330 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 BEST1O76090 585 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 ATF2P15336 505 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 TNFAIP3P21580 790 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 CYP2F1P24903 491 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 ADCY1Q08828 1119 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 TPGS2Q68CL5 300 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 TMTC1Q8IUR5 882 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 WDTC1Q8N5D0 677 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 SLC30A5Q8TAD4 765 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 SPPL2BQ8TCT7 592 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 FUBP3Q96I24 572 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 PDCL3Q9H2J4 239 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
CCDC90B-201ENST00000260054 SEPT11Q9NVA2 429 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms