RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 OR6S1Q8NH40 331 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 LRRC8CQ8TDW0 803 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 GRK7Q8WTQ7 553 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 TARS2Q9BW92 718 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 SENP6Q9GZR1 1112 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 NT5C3AQ9H0P0 336 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 STMN4Q9H169 189 aaPredicted RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 SYNDIG1Q9H7V2 258 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 MRPL44Q9H9J2 332 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 BRD7Q9NPI1 651 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 DDX43Q9NXZ2 648 aaKnown RBP8.09□□□□□ -1.11
GPNMB-201ENST00000258733 VWA7Q9Y334 891 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 MAD1L1Q9Y6D9 718 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 ABCA6Q8N139 1617 aa8.09□□□□□ -1.11
GPNMB-201ENST00000258733 JCADQ9P266 1359 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TNPO2O14787 897 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 AXIN1O15169 862 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TSC22D2O75157 780 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MAFO75444 373 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TRMUO75648 421 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 HOXA6P31267 233 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MAGEA11P43364 429 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ABCG1P45844 678 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SCNN1GP51170 649 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 CAP1Q01518 475 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 AIMP1Q12904 312 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 POLA2Q14181 598 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 DMC1Q14565 340 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 PON2Q15165 354 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 VWA5B1Q5TIE3 1220 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 BNC2Q6ZN30 1099 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 HS2ST1Q7LGA3 356 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 DCP2Q8IU60 420 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 IFNL2Q8IZJ0 200 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 C2orf69Q8N8R5 385 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 RFWD2Q8NHY2 731 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 GANCQ8TET4 914 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 AFG1LQ8WV93 481 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ART5Q96L15 291 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SEC22CQ9BRL7 303 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TFB2MQ9H5Q4 396 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 C10orf88Q9H8K7 445 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 PPARGC1AQ9UBK2 798 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SH3BGRL2Q9UJC5 107 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SIK3Q9Y2K2 1263 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF175Q9Y473 711 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 KIF1BO60333 1816 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ASXL1Q8IXJ9 1541 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 C3P01024 1663 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SHPRHQ149N8 1683 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ST20-MTHFSA0A0A6YYL1 179 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 A0A0G2JPF8 293 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ZSCAN5CA6NGD5 496 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 CCDC160A6NGH7 325 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ZNF233A6NK53 670 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 HNRNPCL3B7ZW38 293 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 RASGRF2O14827 1237 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 BET1O15155 118 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 PDE8AO60658 829 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 NBNO60934 754 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TIPRLO75663 272 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ITGB1P05556 798 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 FAM228BP0C875 321 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 HNRNPCL4P0DMR1 293 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 HSD3B2P26439 372 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 EPHB4P54760 987 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ASPHQ12797 758 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 DUSP4Q13115 394 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 AP3B2Q13367 1082 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 EFTUD2Q15029 972 aaKnown RBP eCLIP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 PPA1Q15181 289 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 PUM3Q15397 648 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 CCDC6Q16204 474 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MDH1BQ5I0G3 518 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 PLEKHA7Q6IQ23 1121 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 EMBQ6PCB8 327 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 RBM44Q6ZP01 1051 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 UNC13DQ70J99 1090 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 NET1Q7Z628 596 aaPredicted RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 KIAA2013Q8IYS2 634 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 NKX2-3Q8TAU0 364 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 RNF139Q8WU17 664 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 ERLEC1Q96DZ1 483 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 CHMP6Q96FZ7 201 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MOV10Q9HCE1 1003 aaKnown RBP8.08□□□□□ -1.12
GPNMB-201ENST00000258733 LZTFL1Q9NQ48 299 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 NCKIPSDQ9NZQ3 722 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TINAGQ9UJW2 476 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SPATA2Q9UM82 520 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 GTF2A1LQ9UNN4 478 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 MED16Q9Y2X0 877 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 HCN4Q9Y3Q4 1203 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 PCDH11YQ9BZA8 1340 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 OR5K3A6NET4 321 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 TOM1O60784 492 aa8.08□□□□□ -1.12
GPNMB-201ENST00000258733 OPHN1O60890 802 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms