RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 MAPK4P31152 587 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 RXRGP48443 463 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 IFNAR2P48551 515 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CDC16Q13042 620 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 RILPL1Q5EBL4 403 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 C6orf183Q5T699 404 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 DCDC5Q6ZRR9 648 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 HPS3Q969F9 1004 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 COA7Q96BR5 231 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CCDC138Q96M89 665 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 SERPINB12Q96P63 405 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 TGS1Q96RS0 853 aaKnown RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 GPATCH1Q9BRR8 931 aaKnown RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 NEUROG2Q9H2A3 272 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 Q9H521 79 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 PSTPIP2Q9H939 334 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 LY9Q9HBG7 655 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 CNGB3Q9NQW8 809 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 ZNF214Q9UL59 606 aaPredicted RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 GABRQQ9UN88 632 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 TFR2Q9UP52 801 aa12.4□□□□□ -0.42
CCNA1-201ENST00000255465 NOC2LQ9Y3T9 749 aaKnown RBP12.4□□□□□ -0.42
CCNA1-201ENST00000255465 PLXNA1Q9UIW2 1896 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 PGRMC1O00264 195 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 RGS13O14921 159 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 MCF2LO15068 1137 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 PEX1O43933 1283 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 BMP15O95972 392 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 SMIM18P0DKX4 95 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 ANPEPP15144 967 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 SLC16A2P36021 539 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 NEK3P51956 506 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 ATN1P54259 1190 aaPredicted RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 NR1H2P55055 460 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 PRMT2P55345 433 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 ATP6V0D1P61421 351 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 CYP27A1Q02318 531 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 PRKCZQ05513 592 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 NAB2Q15742 525 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 ANKRD20A4Q4UJ75 823 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 TUBA3EQ6PEY2 450 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 MIER3Q7Z3K6 550 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 GPR142Q7Z601 462 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 ATP6V0D2Q8N8Y2 350 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 OR6Y1Q8NGX8 325 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 ARHGEF2Q92974 986 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 PAGE5Q96GU1 130 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 MAELQ96JY0 434 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 HAUS8Q9BT25 410 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 LRRC2Q9BYS8 371 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 SLC38A10Q9HBR0 1119 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 MOV10Q9HCE1 1003 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 TYW1Q9NV66 732 aaKnown RBP12.39□□□□□ -0.43
CCNA1-201ENST00000255465 GNPTGQ9UJJ9 305 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 PRR12Q9ULL5 1215 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 CHKBQ9Y259 395 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 B3GNT3Q9Y2A9 372 aa12.39□□□□□ -0.43
CCNA1-201ENST00000255465 SMIM23A6NLE4 172 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 ZNF701M0R085 212 aaPredicted RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 RASGRF2O14827 1237 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 GSC2O15499 205 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 FDX1P10109 184 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 STAT3P40763 770 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 PRCPP42785 496 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 FLT3LGP49771 235 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 NOP14P78316 857 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 TRADDQ15628 312 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 ZNF829Q3KNS6 432 aaPredicted RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 VWA3BQ502W6 1294 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 COBLL1Q53SF7 1204 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 MMAAQ8IVH4 418 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 KLHL7Q8IXQ5 586 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 SPARTQ8N0X7 666 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 CPXCR1Q8N123 301 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 MARVELD2Q8N4S9 558 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 TERB1Q8NA31 727 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 SHCBP1Q8NEM2 672 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 TOR1AIP2Q8NFQ8 470 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 PRPF31Q8WWY3 499 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 C8orf48Q96LL4 319 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 CADM1Q9BY67 442 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 EPB41L4BQ9H329 900 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 ZNF696Q9H7X3 374 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 DDX18Q9NVP1 670 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 MTRF1LQ9UGC7 380 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 RABGEF1Q9UJ41 708 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 GJD2Q9UKL4 321 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 DIS3Q9Y2L1 958 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms