RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TMEM8AQ9HCN3 771 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CYP26B1Q9NR63 512 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ARHGEF3Q9NR81 526 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TBX20Q9UMR3 447 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SLC4A7Q9Y6M7 1214 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PRPF4O43172 522 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 FESP07332 822 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TRIM49P0CI25 452 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TRIM49CP0CI26 452 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 GARTP22102 1010 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 FGFR4P22455 802 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CTCFP49711 727 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ANKRD20A4Q4UJ75 823 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 VSTM1Q6UX27 236 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ADAT2Q7Z6V5 191 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 RTKN2Q8IZC4 609 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 NIPA2Q8N8Q9 360 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 FBXL13Q8NEE6 735 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MCPH1Q8NEM0 835 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 EXD1Q8NHP7 514 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ZC3H15Q8WU90 426 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ATP6V0A1Q93050 837 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TAAR1Q96RJ0 339 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CYTH2Q99418 400 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 XYLT2Q9H1B5 865 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 HSPBP1Q9NZL4 362 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DNAJB4Q9UDY4 337 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ZMYND8Q9ULU4 1186 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 POC1B-GALNT4F8VUJ3 575 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 KLHL2O95198 593 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CETPP11597 493 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 P4HA1P13674 534 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 NPTX2P47972 431 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 HIRAP54198 1017 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MPP2Q14168 576 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PSMD6Q15008 389 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 QPCTQ16769 361 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PADI6Q6TGC4 694 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 RGS9BPQ6ZS82 235 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MDM1Q8TC05 714 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 AGAP11Q8TF27 550 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PARVAQ9NVD7 372 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ETAA1Q9NY74 926 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PHTF1Q9UMS5 762 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PCDHB2Q9Y5E7 798 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 EMSYQ7Z589 1322 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SFI1A8K8P3 1242 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MCF2LO15068 1137 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MSCO60682 206 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 STAM2O75886 525 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SGPL1O95470 568 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 KRT1P04264 644 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SHBGP04278 402 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PYGMP11217 842 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 GCLCP48506 637 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 RPS6P62753 249 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CYP4A11Q02928 519 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF211Q13398 564 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PRKG1Q13976 671 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TMEM132BQ14DG7 1078 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 AMHR2Q16671 573 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PHF13Q86YI8 300 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CCDC125Q86Z20 511 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 UHMK1Q8TAS1 419 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 RAB3IL1Q8TBN0 382 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 RBM15Q96T37 977 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 HAUS8Q9BT25 410 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DDX23Q9BUQ8 820 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SLC24A3Q9HC58 644 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MYOZ2Q9NPC6 264 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SLC5A4Q9NY91 659 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 WDR35Q9P2L0 1181 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 APOBEC2Q9Y235 224 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 A0A0B4J269 797 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DYTNA2CJ06 578 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DNM1LO00429 736 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ZBED4O75132 1171 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DPEP1P16444 411 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PTPRAP18433 802 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DSG3P32926 999 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 RPL21P46778 160 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ITGA8P53708 1063 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 GEMIN4P57678 1058 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 PIGHQ14442 188 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TEDDM1Q5T9Z0 273 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 TMEM154Q6P9G4 183 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 SETD3Q86TU7 594 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 CBWD2Q8IUF1 395 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ZCCHC9Q8N567 271 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 DDI1Q8WTU0 396 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 MTBPQ96DY7 904 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 VPS11Q9H270 941 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 STN1Q9H668 368 aaKnown RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 ACP6Q9NPH0 428 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 FARP1Q9Y4F1 1045 aaPredicted RBP4.35□□□□□ -1.71
UBE4A-201ENST00000252108 NUMBLQ9Y6R0 609 aa4.35□□□□□ -1.71
UBE4A-201ENST00000252108 H0YIN7 160 aa4.34□□□□□ -1.71
UBE4A-201ENST00000252108 C2CD2LO14523 706 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms