RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 ALKBH8Q96BT7 664 aaKnown RBP16.48■□□□□ 0.23
SIN3B-201ENST00000248054 NDE1Q9NXR1 346 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 APOBEC2Q9Y235 224 aaKnown RBP16.48■□□□□ 0.23
SIN3B-201ENST00000248054 IRF6O14896 467 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 MAFO75444 373 aaPredicted RBP16.48■□□□□ 0.23
SIN3B-201ENST00000248054 TADA2AO75478 443 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 MYL6P60660 151 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 TMPRSS15P98073 1019 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 PDK1Q15118 436 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 POTEAQ6S8J7 498 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 ZC3H18Q86VM9 953 aaKnown RBP16.48■□□□□ 0.23
SIN3B-201ENST00000248054 ARHGAP18Q8N392 663 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 MAML1Q92585 1016 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 TMEM176AQ96HP8 235 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 FGD4Q96M96 766 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 GPBP1L1Q9HC44 474 aaPredicted RBP16.48■□□□□ 0.23
SIN3B-201ENST00000248054 DSEQ9UL01 958 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 ATP6V1G2O95670 118 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 PYGBP11216 843 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 GRIK1P39086 918 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 CASP5P51878 434 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 EPC2Q52LR7 807 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 SLC47A2Q86VL8 602 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 C3orf20Q8ND61 904 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 PDZD8Q8NEN9 1154 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 MBOAT7Q96N66 472 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 FAM49BQ9NUQ9 324 aa16.48■□□□□ 0.23
SIN3B-201ENST00000248054 SLC15A5A6NIM6 579 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 GOLGA8MH3BSY2 632 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 KCNN4O15554 427 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 TAC1P20366 129 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 CARSP49589 748 aaKnown RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 BCAT1P54687 386 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 RAD23BP54727 409 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 EPHB1P54762 984 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 OR2W6PQ8NHA6 318 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 PPWD1Q96BP3 646 aaKnown RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 NRBF2Q96F24 287 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 UBN1Q9NPG3 1134 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 VTNP04004 478 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 RAB27AP51159 221 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 MAP1SQ66K74 1059 aaPredicted RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 TRIM33Q9UPN9 1127 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 NEU2Q9Y3R4 380 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 ZBTB39O15060 712 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 CDC25CP30307 473 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 CCNHP51946 323 aaPredicted RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 SLC20A1Q8WUM9 679 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 C12orf42Q96LP6 360 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 MTG1Q9BT17 334 aaPredicted RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 CCT8L1PA6NM43 557 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 CST8O60676 142 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 CCND1P24385 295 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 KRT80Q6KB66 452 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 MCOLN2Q8IZK6 566 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 IL31RAQ8NI17 732 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 TGS1Q96RS0 853 aaKnown RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 GANQ9H2C0 597 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 DDX20Q9UHI6 824 aaKnown RBP16.47■□□□□ 0.23
SIN3B-201ENST00000248054 CPA4Q9UI42 421 aa16.47■□□□□ 0.23
SIN3B-201ENST00000248054 FBXO21O94952 628 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 AKR1A1P14550 325 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 KIZQ2M2Z5 673 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 ANO4Q32M45 955 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 CCDC124Q96CT7 223 aaKnown RBP16.46■□□□□ 0.23
SIN3B-201ENST00000248054 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.46■□□□□ 0.23
SIN3B-201ENST00000248054 DMGDHQ9UI17 866 aaKnown RBP16.46■□□□□ 0.23
SIN3B-201ENST00000248054 SOX10P56693 466 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 SPOPLQ6IQ16 392 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 ARHGEF19Q8IW93 802 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 PPM1NQ8N819 430 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 SP110Q9HB58 689 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 PAPOLBQ9NRJ5 636 aaKnown RBP16.46■□□□□ 0.23
SIN3B-201ENST00000248054 WHRNQ9P202 907 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 BARX2Q9UMQ3 279 aaPredicted RBP16.46■□□□□ 0.23
SIN3B-201ENST00000248054 PCDHGC5Q9Y5F6 944 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 DDX3XO00571 662 aaKnown RBP eCLIP16.46■□□□□ 0.23
SIN3B-201ENST00000248054 CCDC22O60826 627 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 LGALS2P05162 132 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 PMLP29590 882 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 PID1Q7Z2X4 250 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 ZDHHC17Q8IUH5 632 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 UBA3Q8TBC4 463 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 IFT43Q96FT9 208 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 KLHL11Q9NVR0 708 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 SPDYE5A6NIY4 337 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 EEF2KO00418 725 aaKnown RBP16.46■□□□□ 0.23
SIN3B-201ENST00000248054 LHX1P48742 406 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 ZBTB17Q13105 803 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 SPATA18Q8TC71 538 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 ST6GALNAC4Q9H4F1 302 aa16.46■□□□□ 0.23
SIN3B-201ENST00000248054 ANKRD63C9JTQ0 380 aa16.45■□□□□ 0.22
SIN3B-201ENST00000248054 HSPA4LO95757 839 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms