RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ARMC3Q5W041 872 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 IGDCC3Q8IVU1 814 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 NMUR2Q9GZQ4 415 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 NR2E3Q9Y5X4 410 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 LAMB2P55268 1798 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 TOM1L1O75674 476 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 SERPINB4P48594 390 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 ATXN3P54252 364 aaPredicted RBP17.69■□□□□ 0.42
SGPP1-201ENST00000247225 CASC4Q6P4E1 433 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 SLC30A9Q6PML9 568 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 CCDC60Q8IWA6 550 aaPredicted RBP17.69■□□□□ 0.42
SGPP1-201ENST00000247225 ALLCQ8N6M5 410 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 JOSD2Q8TAC2 188 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 TRIM11Q96F44 468 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 NSL1Q96IY1 281 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 PPP1R36Q96LQ0 422 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 PAPOLBQ9NRJ5 636 aaKnown RBP17.69■□□□□ 0.42
SGPP1-201ENST00000247225 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
SGPP1-201ENST00000247225 CORO1CQ9ULV4 474 aaPredicted RBP17.69■□□□□ 0.42
SGPP1-201ENST00000247225 CLUHO75153 1309 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 TTLL13PA6NNM8 815 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 CCDC22O60826 627 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 TBX10O75333 385 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 RBP3P10745 1247 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 RPL22P35268 128 aaKnown RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 VCPP55072 806 aaKnown RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 EIF3EP60228 445 aaKnown RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 MYBPC2Q14324 1141 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 MROH9Q5TGP6 573 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 C4orf50Q6ZRC1 276 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 KATNAL2Q8IYT4 538 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 ATP11CQ8NB49 1132 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 DENND1AQ8TEH3 1009 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 CPSF2Q9P2I0 782 aaKnown RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 LOC100653049A0A140TA62 436 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 TRIM49D1C9J1S8 452 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 FCHO1O14526 889 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 PSTPIP1O43586 416 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 KRT34O76011 436 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 VNN1O95497 513 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 F7P08709 466 aaPredicted RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 ETS2P15036 469 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 PSMC1P62191 440 aaKnown RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.68■□□□□ 0.42
SGPP1-201ENST00000247225 FAF2Q96CS3 445 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 ATG4CQ96DT6 458 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 SERAC1Q96JX3 654 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 SCOCQ9UIL1 159 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 SCINQ9Y6U3 715 aa17.68■□□□□ 0.42
SGPP1-201ENST00000247225 COPEO14579 308 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 STK10O94804 968 aaKnown RBP17.67■□□□□ 0.42
SGPP1-201ENST00000247225 ICAM1P05362 532 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 MAPTP10636 758 aaKnown RBP17.67■□□□□ 0.42
SGPP1-201ENST00000247225 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 ZNF568Q3ZCX4 644 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 TFDP3Q5H9I0 405 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 TTC25Q96NG3 672 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 PDCD2LQ9BRP1 358 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 DCLRE1BQ9H816 532 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 YDJCA8MPS7 323 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 KBTBD13C9JR72 458 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 GSC2O15499 205 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 UGT1A9O60656 530 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 TMEM63AO94886 807 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 NR3C2P08235 984 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 GCNT1Q02742 428 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 SPATA18Q8TC71 538 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 MFSD14AQ96MC6 490 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 UGT1A7Q9HAW7 530 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 UGT1A10Q9HAW8 530 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 UGT1A8Q9HAW9 530 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 RAB6BQ9NRW1 208 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 RABGEF1Q9UJ41 708 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 GNAZP19086 355 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 CALRP27797 417 aaKnown RBP17.67■□□□□ 0.42
SGPP1-201ENST00000247225 NEK3P51956 506 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 IRX1P78414 480 aaPredicted RBP17.67■□□□□ 0.42
SGPP1-201ENST00000247225 RASA2Q15283 850 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 EML3Q32P44 896 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 RAB6CQ53S08 254 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 RSPH3Q86UC2 560 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 FAM160B2Q86V87 743 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 TTLL6Q8N841 843 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 SHKBP1Q8TBC3 707 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 ASAP3Q8TDY4 903 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 CPT1BQ92523 772 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 GBP5Q96PP8 586 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 BTBD10Q9BSF8 475 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 MOV10L1Q9BXT6 1211 aaKnown RBP17.67■□□□□ 0.42
SGPP1-201ENST00000247225 RAB6CQ9H0N0 254 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 ACSS2Q9NR19 701 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 PCMTD2Q9NV79 361 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 TAS2R1Q9NYW7 299 aa17.67■□□□□ 0.42
SGPP1-201ENST00000247225 APRTP07741 180 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 KRT3P12035 628 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 ATP6V1C1P21283 382 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms